TNFR1 mRNA expression level and TNFR1 gene polymorphisms are predictive markers for susceptibility to develop
J Sainz1, I Salas-Alvarado, E López-Fernández
1Experimental Research Unit, Virgen de las Nieves University Hospital, Granada, Spain. jsainz@ugr.es
Abstract:
Tumour necrosis factor (TNF) is primarily secreted by monocytes/macrophages and activated T lymphocytes in response to fungal infections. TNF acts through TNF receptor 1 (TNFR1) triggering a pro-inflammatory response, and therefore plays a pivotal role in immune regulation and host immune responses. We hypothesized that single nucleotide polymorphisms (SNPs) in TNFR1 gene may influence the innate immune response against Aspergillus. Three SNPs were genotyped in 275 individuals (144 immunocompromised haematological patients with high-risk of developing IPA and 131 healthy controls): TNFR1(-383(A/C)) (rs2234649) and TNFR1(-609(G/T)) (rs4149570) in the 5 prime UTR region, and TNFR1(+36(A/G)) SNP (rs767455) in the first exon of the gene. Of the 144 haematological patients, 77 patients developed Invasive Pulmonary Aspergillosis (IPA) infection and the remaining 67 patients were not infected. TNFR1(+36(A/G)) and TNFR1(-609(G/T)) were associated with IPA susceptibility (p=0.033 and p=0.018, respectively). A role of TNFR1 genetic variants in the susceptibility of patients to develop IPA was also supported by the significantly lower TNFR1 mRNA expression level in IPA than in IPA-resistant patients and the strong correlation between the TNFR1(-609) genetic variant and the expression levels of TNFR1. There was also a tendency for a higher frequency of galactomannan (GM) positivity in patients with TNFR1(-609G/G) genotype than in patients with TNFR1(-609G/T) (p=0.0909) or TNFR1(-609T/T) (p=0.0913) genotype. Predictive sequence analysis of the effects of TNFR1(-609) promoter polymorphism revealed that this SNP might play a critical role in modifying the affinity of ICSBP/IRF-8, a transcription factor that is involved in the TNFR1-mediated activation of NFkappaB signalling pathway. Taken together, these data suggest that TNFR1 polymorphisms influence the risk of IPA disease and might be useful for risk stratification strategies. These findings need to be confirmed in validation studies with larger samples of haematological patients.
Insights
Genetic variations in the Tumour Necrosis Factor Receptor 1 (TNFR1) gene are linked to Invasive Pulmonary Aspergillosis (IPA) susceptibility in haematological patients. These TNFR1 polymorphisms may aid in stratifying patient risk for IPA development.
Area of Science:
- Immunology
- Genetics
Background:
- Tumour necrosis factor (TNF) is crucial for immune responses against fungal infections, acting via TNF receptor 1 (TNFR1).
- Genetic variations, specifically single nucleotide polymorphisms (SNPs), in the TNFR1 gene could influence susceptibility to infections like Invasive Pulmonary Aspergillosis (IPA).
Purpose of the Study:
- To investigate the association between TNFR1 gene polymorphisms and susceptibility to IPA in immunocompromised haematological patients.
- To explore the correlation between TNFR1 genetic variants, TNFR1 mRNA expression, and IPA development.
Main Methods:
- Genotyping of three TNFR1 SNPs (rs2234649, rs4149570, rs767455) in 275 individuals (144 haematological patients, 131 controls).
- Analysis of IPA susceptibility, TNFR1 mRNA expression levels, and galactomannan (GM) positivity in relation to specific genotypes.
- Predictive sequence analysis of the TNFR1(-609) promoter polymorphism's effect on transcription factor binding.
Main Results:
- TNFR1(+36(A/G)) and TNFR1(-609(G/T)) SNPs were significantly associated with IPA susceptibility (p=0.033 and p=0.018, respectively).
- IPA patients exhibited significantly lower TNFR1 mRNA expression compared to IPA-resistant patients, with a strong correlation between the TNFR1(-609) variant and expression levels.
- A trend towards higher galactomannan positivity was observed in patients with the TNFR1(-609G/G) genotype.
Conclusions:
- TNFR1 genetic polymorphisms are associated with IPA susceptibility in haematological patients.
- These findings suggest that TNFR1 variants may play a role in the innate immune response against Aspergillus and could be useful for IPA risk stratification.
- Further validation studies with larger patient cohorts are warranted to confirm these associations.
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