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Monitoring Cell-autonomous Circadian Clock Rhythms of Gene Expression Using Luciferase Bioluminescence Reporters
Published on: September 27, 2012
Genetic variants and abnormal processing of pre-miR-182, a circadian clock modulator, in major depression patients
Ester Saus1, Virginia Soria, Geòrgia Escaramís
1Genes and Disease Program, Center for Genomic Regulation-UPF, and CIBER en Epidemiología y Salud Pública, Barcelona 08003, Catalonia, Spain.
Abstract:
Previous studies in mice have reported five different microRNAs (miRNAs; miR-219-1/132/183/96/182) to be modulators of the endogenous circadian clock and have presented experimental evidence for some of the genes involved in the molecular clock machinery as target sites. Moreover, disruption of circadian rhythms has long been implicated in the pathophysiology of major depression (MD). We investigated these miRNAs and some of their target sites at the sequence and functional levels as possible predisposing factors for susceptibility to MD and related chronobiological subphenotypes. Mutational screening was performed in a sample of 359 MD patients and 341 control individuals. We found a significant association between the T allele of the rs76481776 polymorphism in the pre-miR-182 and late insomnia in MD patients. Previous studies have reported an association between insomnia and CLOCK gene, a predicted miR-182 target site. A significant overexpression of miR-182 was detected by quantitative real-time polymerase chain reaction in cells transfected with the mutated form of the pre-miR-182 when compared with wild-type form. Moreover, a significant reduction in luciferase activity of plasmids with 3' UTR of ADCY6, CLOCK and DSIP genes was shown when transfecting cells with the mutated form of pre-miR-182 compared with cells that did not express miR-182. These data indicate that abnormal processing of pre-miR-182 in patients carrying the T allele of the rs76481776 polymorphism may contribute to the dysregulation of circadian rhythms in MD patients with insomnia, which could influence expression levels of the mature form of miR-182 and might increase downregulation in some of its target genes.
Insights
A genetic variant in pre-microRNA-182 (miR-182) is linked to insomnia in major depression patients. This finding suggests a role for miR-182 in circadian rhythm disruption and major depression susceptibility.
Area of Science:
- Genetics
- Neuroscience
- Molecular Biology
Background:
- Circadian rhythm disruption is linked to major depression.
- MicroRNAs (miRNAs) like miR-182 are known modulators of the circadian clock.
- Previous studies suggest a link between miRNAs, circadian rhythm, and depression.
Purpose of the Study:
- Investigate specific miRNAs and their target genes as potential predisposing factors for major depression (MD).
- Examine the role of miR-182 and its genetic variants in MD pathophysiology, particularly in relation to insomnia and circadian rhythm disturbances.
Main Methods:
- Performed mutational screening of miRNAs and their targets in 359 MD patients and 341 controls.
- Utilized quantitative real-time polymerase chain reaction to assess miR-182 expression.
- Employed luciferase reporter assays to evaluate the functional impact of miR-182 on target genes (ADCY6, CLOCK, DSIP).
Main Results:
- A significant association was found between the rs76481776 polymorphism in pre-miR-182 and late insomnia in MD patients.
- Overexpression of miR-182 was observed in cells with the mutated pre-miR-182 form.
- Mutated miR-182 significantly reduced luciferase activity in target genes ADCY6, CLOCK, and DSIP.
Conclusions:
- The T allele of the rs76481776 polymorphism in pre-miR-182 may contribute to circadian rhythm dysregulation in MD patients with insomnia.
- Abnormal miR-182 processing could impact mature miR-182 levels and downstream gene expression, potentially influencing MD susceptibility.
- This study highlights a potential genetic link between miR-182, circadian rhythms, and major depression.
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