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The human peripheral subunit-binding domain folds rapidly while overcoming repulsive Coulomb forces
Eyal Arbely1, Hannes Neuweiler, Timothy D Sharpe
1Medical Research Council Centre for Protein Engineering, Cambridge, United Kingdom.
Protein Science : a Publication of the Protein Society
|July 28, 2010
Summary
Human Peripheral Subunit Binding Domains (HSBD) fold rapidly but are marginally stable due to high positive surface charges. Electrostatic forces influence folding and stability, with implications for protein evolution.
Area of Science:
- Biochemistry
- Structural Biology
- Protein Folding
Background:
- Peripheral subunit binding domains (PSBDs) are key components of multienzyme complexes in carbohydrate metabolism.
- PSBDs are crucial for prosthetic group transfer between catalytic subunits.
- A high density of positive charges on the PSBD surface is essential for subunit binding.
Purpose of the Study:
- To investigate the folding thermodynamics and kinetics of the human PSBD (HSBD).
- To understand the role of electrostatic interactions in HSBD stability and folding.
- To explore the evolutionary trade-offs between protein function and stability.
Main Methods:
- Circular dichroism spectroscopy to study protein folding.
- Tryptophan fluorescence experiments to monitor protein dynamics.
- Analysis of ionic-strength dependent folding behavior.
Main Results:
- HSBD exhibits marginal stability under physiological conditions.
- Folding occurs rapidly (microseconds) via a barrier-limited, apparent two-state transition.
- High positive surface charge density creates repulsive forces affecting stability and kinetics.
- Electrostatic strain is mitigated by Debye-Hückel screening at high ionic strength.
Conclusions:
- HSBD folding kinetics and stability are significantly modulated by electrostatic forces.
- Differences in surface charge distribution explain varying ionic-strength dependencies among PSBDs.
- Protein evolution balances functional requirements with stability constraints.
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