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Updated: Jun 10, 2026

A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
KIT polymorphisms and mutations determine responses of neoplastic mast cells to bafetinib (INNO-406)
Barbara Peter1, Emir Hadzijusufovic, Katharina Blatt
1Department of Internal Medicine I, Division of Hematology and Hemostaseology, Medical University of Vienna, Vienna, Austria.
Objective:
Advanced systemic mastocytosis (SM) is characterized by uncontrolled growth of neoplastic mast cells (MC) and drug resistance. The tyrosine kinase receptor KIT is often mutated and activated and thus contributes to malignant growth of MC. Therefore, KIT-targeting drugs are currently tested for their ability to block growth of malignant MC.
Materials And Methods:
We determined the effects of the multikinase inhibitor INNO-406 (bafetinib) on primary neoplastic MC, the canine mastocytoma cell line C2, the human MC leukemia cell line HMC-1.1 bearing the KIT mutant V560G, and HMC-1.2 cells harboring KIT V560G and KIT D816V.
Results:
INNO-406 was found to inhibit proliferation in HMC-1.1 cells (IC(50): 30-40 nM), but not in HMC-1.2 cells or primary neoplastic cells in patients with KIT D816V-positive SM. In canines, growth-inhibitory effects of INNO-406 were seen in C2 cells (IC(50): 50-100 nM) exhibiting a KIT exon 11 internal tandem-duplication and in primary neoplastic MC harboring wild-type exon 11, whereas no effects were seen in MC exhibiting a polymorphism at amino acid 581 in exon 11. INNO-406 was found to block KIT phosphorylation and expression in HMC-1.1 cells and C2 cells, but not in HMC-1.2 cells, whereas Lyn-phosphorylation was blocked by INNO-406 in all types of MC.
Conclusions:
In neoplastic MC, the major target of INNO-406 appears to be KIT. Drug responses may depend on the presence and type of KIT mutation. In human MC, the KIT D816V mutant introduces resistance, and in canine mastocytomas, an exon 11 polymorphism may be indicative of resistance against INNO-406.
Insights
The multikinase inhibitor INNO-406 effectively targets KIT in certain mastocytosis models but shows resistance with specific KIT mutations. Drug response in neoplastic mast cells depends on the type of KIT mutation present.
Area of Science:
- Oncology
- Hematology
- Pharmacology
Background:
- Advanced systemic mastocytosis (SM) involves uncontrolled neoplastic mast cell (MC) growth and drug resistance.
- The tyrosine kinase receptor KIT, often mutated, drives malignant MC proliferation, making it a target for new therapies.
Purpose of the Study:
- To evaluate the efficacy of the multikinase inhibitor INNO-406 (bafetinib) against neoplastic mast cells.
- To determine the impact of specific KIT mutations on INNO-406's inhibitory effects in human and canine mastocytosis models.
Main Methods:
- Assessed INNO-406's effects on primary neoplastic MC, canine mastocytoma cell line C2, and human MC leukemia cell lines HMC-1.1 and HMC-1.2.
- Analyzed KIT and Lyn phosphorylation and expression in response to INNO-406 treatment.
Main Results:
- INNO-406 inhibited proliferation in HMC-1.1 cells (KIT V560G) and canine C2 cells (KIT exon 11 ITD) but not in HMC-1.2 cells (KIT V560G/KIT D816V) or KIT D816V-positive SM.
- INNO-406 blocked KIT phosphorylation in sensitive cell lines but not in resistant ones, while Lyn phosphorylation was inhibited across all tested MC types.
- Resistance to INNO-406 was observed in human MC with the KIT D816V mutation and in canine MC with a specific exon 11 polymorphism.
Conclusions:
- INNO-406 primarily targets KIT in neoplastic MC, with efficacy dependent on the specific KIT mutation.
- The KIT D816V mutation confers resistance in human mastocytosis, while an exon 11 polymorphism may indicate resistance in canine mastocytomas.
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