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Updated: Jun 10, 2026

Quantitative Structure-Activity Relationship, Activity Prediction, and Molecular Dynamics of Non-nucleotide Reverse Transcriptase Inhibitors
Published on: May 9, 2025
Structure-activity relationships of GPR120 agonists based on a docking simulation.
Qi Sun1, Akira Hirasawa, Takafumi Hara
1Department of Genomic Drug Discovery Science, Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Yoshida Shimoadachi-cho, Sakyo-ku, Kyoto 606-8501, Japan.
Researchers developed novel GPR120 agonists by synthesizing NCG compounds. Docking simulations accurately predicted compound activity, with NCG21 showing potent G protein-coupled receptor 120 (GPR120) agonistic effects and increasing glucagon-like peptide-1 (GLP-1) levels in vivo.
Area of Science:
- Pharmacology
- Molecular Biology
- Computational Chemistry
Background:
- G protein-coupled receptor 120 (GPR120) is expressed in the gut and adipose tissue, playing a role in free fatty acid-stimulated glucagon-like peptide-1 (GLP-1) secretion.
- Developing specific GPR120 agonists is crucial for therapeutic applications, particularly in metabolic and endocrine disorders.
Purpose of the Study:
- To synthesize and explore structure-activity relationships of novel GPR120 agonists.
- To evaluate the utility of computational docking simulations in predicting GPR120 agonistic activity.
Main Methods:
- Synthesis of NCG compounds derived from a peroxisome proliferator-activated receptor γ agonist.
- Development of a GPR120 homology model based on rhodopsin crystal structure for docking simulations.
- Calculation of hydrogen bonding energies between compounds and the GPR120 model.
- In vitro assays measuring extracellular signal-regulated kinase (ERK) activation, intracellular calcium responses, and GLP-1 secretion.
- In vivo administration of NCG21 in mice to assess plasma GLP-1 levels.
Main Results:
- Hydrogen bonding energies from docking simulations correlated well with GPR120 agonistic activity (R² = 0.73).
- NCG21 exhibited the lowest calculated hydrogen bonding energy and demonstrated potent ERK activation in a cloned GPR120 system.
- NCG21 effectively activated ERK, calcium signaling, and GLP-1 secretion in STC-1 cells and increased plasma GLP-1 levels upon colonic administration in mice.
Conclusions:
- The synthesized NCG compounds, particularly NCG21, show significant GPR120 agonistic activity.
- Docking simulations using a GPR120 homology model are a valuable tool for predicting the agonistic potential of novel compounds.
- NCG21 represents a promising GPR120 agonist with potential for modulating GLP-1 secretion.
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