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Updated: Jun 10, 2026

Electrophoretic Analysis of Replication Through Structure-Prone DNA Repeats Within the SV40-Based Human Episome
Published on: September 13, 2024
Simian virus 40 activates ATR-Delta p53 signaling to override cell cycle and DNA replication control
Gabor Rohaly1, Katharina Korf, Silke Dehde
1Heinrich-Pette-Institut für Experimentelle Virologie und Immunologie, Martinistr. 52, D-20251 Hamburg, Germany.
Abstract:
During infection, simian virus 40 (SV40) attempts to take hold of the cell, while the host responds with various defense systems, including the ataxia-telangiectasia mutated/ATM-Rad3 related (ATM/ATR)-mediated DNA damage response pathways. Here we show that upon viral infection, ATR directly activates the p53 isoform Δp53, leading to upregulation of the Cdk inhibitor p21 and downregulation of cyclin A-Cdk2/1 (AK) activity, which force the host to stay in the replicative S phase. Moreover, downregulation of AK activity is a prerequisite for the generation of hypophosphorylated, origin-competent DNA polymerase α-primase (hypo-Polα), which is, unlike AK-phosphorylated Polα (P-Polα), recruited by SV40 large T antigen (T-Ag) to initiate viral DNA replication. Prevention of the downregulation of AK activity by inactivation of ATR-Δp53-p21 signaling significantly reduced the T-Ag-interacting hypo-Polα population and, accordingly, SV40 replication efficiency. Moreover, the ATR-Δp53 pathway facilitates the proteasomal degradation of the 180-kDa catalytic subunit of the non-T-Ag-interacting P-Polα, giving rise to T-Ag-interacting hypo-Polα. Thus, the purpose of activating the ATR-Δp53-p21-mediated intra-S checkpoint is to maintain the host in S phase, an optimal environment for SV40 replication, and to modulate the host DNA replicase, which is indispensable for viral amplification.
Insights
Simian virus 40 (SV40) exploits the host DNA damage response, specifically the ATR-Δp53-p21 pathway, to promote viral replication. This pathway maintains the host in S phase and generates a specific DNA polymerase form essential for SV40 DNA synthesis.
Area of Science:
- Virology
- Molecular Biology
- Cellular Biology
Background:
- Simian virus 40 (SV40) infection triggers host defense mechanisms, including the ATM/ATR-mediated DNA damage response.
- Understanding host-viral interactions is crucial for developing antiviral strategies.
Purpose of the Study:
- To elucidate the role of the ATR-Δp53-p21 pathway in SV40 replication.
- To investigate how SV40 manipulates host cell cycle regulation for its own benefit.
Main Methods:
- Investigated the interaction between ATR, p53 isoform Δp53, p21, and cyclin A-Cdk2/1 (AK) activity during SV40 infection.
- Analyzed the recruitment of DNA polymerase α-primase (Polα) by SV40 large T antigen (T-Ag).
- Assessed the impact of ATR-Δp53-p21 signaling inhibition on SV40 replication.
Main Results:
- ATR directly activates Δp53, upregulating p21 and downregulating AK activity, forcing host cells into S phase.
- Downregulated AK activity is necessary for generating hypophosphorylated Polα (hypo-Polα), which is recruited by T-Ag for viral DNA replication.
- Inhibiting the ATR-Δp53-p21 pathway reduced hypo-Polα and SV40 replication efficiency.
- The pathway promotes proteasomal degradation of non-T-Ag-interacting P-Polα, generating T-Ag-interacting hypo-Polα.
Conclusions:
- The ATR-Δp53-p21 pathway creates an optimal S-phase environment for SV40 replication.
- This pathway modulates host DNA replicase, facilitating SV40 amplification.
- SV40 hijacks host cell cycle control to ensure its own replication and propagation.
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