An overlapping kinase and phosphatase docking site regulates activity of the retinoblastoma protein

Alexander Hirschi1, Matthew Cecchini, Rachel C Steinhardt

  • 1Department of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, California, USA.

Insights

Protein phosphatase 1 (PP1) binds the retinoblastoma tumor suppressor protein (Rb) at a site that also binds cyclin-dependent kinase (Cdk). PP1 binding to Rb regulates Rb activity and cell cycle progression.

Area of Science:

  • Molecular biology
  • Cell biology
  • Biochemistry

Background:

  • The retinoblastoma tumor suppressor protein (Rb) controls cell cycle progression.
  • Rb activity is regulated by phosphorylation, which is modulated by kinases and phosphatases.

Purpose of the Study:

  • To characterize the molecular interaction between Rb and protein phosphatase 1 catalytic subunit (PP1c).
  • To elucidate the mechanism by which PP1c regulates Rb activity.

Main Methods:

  • X-ray crystallography to determine the structure of Rb bound to PP1c.
  • Biochemical assays to assess PP1c activity on Rb.
  • Cell-based assays to evaluate the effect of PP1c binding on Rb activity and cell cycle progression.

Main Results:

  • A crystal structure revealed an enzyme docking site in the Rb C-terminal domain essential for PP1c activity.
  • This PP1c docking site overlaps with the cyclin-dependent kinase (Cdk) docking site.
  • Competition between PP1 and Cdk-cyclins for Rb binding maintains Rb activity and inhibits cell-cycle advancement.

Conclusions:

  • Detailed molecular insights into Rb activation by PP1c.
  • A novel regulatory mechanism for Rb involving competition between kinase and phosphatase docking sites.
  • Establishes a new paradigm for understanding cell cycle control by Rb.

Related Concept Videos

PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...
Receptor Tyrosine Kinases01:26

Receptor Tyrosine Kinases

Receptor tyrosine kinases or RTKs are membrane-bound receptors that phosphorylate specific tyrosine on protein substrates. RTKs regulate cellular growth, differentiation, survival, and migration. They contain an extracellular ligand binding domain, a transmembrane domain, and a cytosolic tail with intrinsic kinase activity. Several extracellular signaling molecules activate RTKs in one or more ways and relay the signal downstream. Ligands such as platelet-derived growth factor (PDGF) or...
Negative Regulator Molecules01:23

Negative Regulator Molecules

Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
The Retinoblastoma Gene01:20

The Retinoblastoma Gene

Tumor suppressor genes are normal genes that can slow down cell division, repair DNA mistakes, or program the cells for apoptosis in case of irreparable damage. Hence, they play an essential role in preventing the proliferation of damaged cells.
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
The Retinoblastoma Gene01:20

The Retinoblastoma Gene

Tumor suppressor genes are normal genes that can slow down cell division, repair DNA mistakes, or program the cells for apoptosis in case of irreparable damage. Hence, they play an essential role in preventing the proliferation of damaged cells.
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...