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Updated: Jun 10, 2026

Liquid Chromatography Coupled to Refractive Index or Mass Spectrometric Detection for Metabolite Profiling in Lysate-based Cell-free Systems
Published on: September 23, 2021
LC-MS analysis of low molecular weight organic acids derived from root exudation
Leonhard Jaitz1, Bernhard Mueller, Gunda Koellensperger
1Department of Chemistry, University of Natural Resources and Applied Life Sciences-BOKU Vienna, Vienna, Austria.
Abstract:
A sensitive method for quantification of citric, fumaric, malic, malonic, oxalic, trans aconitic, and succinic acid in soil- and root-related samples is presented. The method is based on a novel, fast, and simple esterification procedure and subsequent analysis via liquid chromatography-mass spectrometry. Derivatization comprises in situ generation of HCl, which catalyzes the Fischer esterification with benzyl alcohol. As a key advance, the esterification with the aromate allows reversed-phase separation and improves electrospray ionization efficiency. The method provided procedural detection limits of 1 nM for citric, 47 nM for fumaric, 10 nM for malic, 10 nM for malonic, 16 nM for oxalic, 15 nM for succinic, and 2 nM for aconitic acid utilizing 500 microL of liquid sample. The working range was 3 nM to 10 microM for citric acid, 158 nM to 10 microM for fumaric acid, 34 nM to 10 microM for malic acid, 33 nM to 10 microM for malonic acid, 53 nM to 10 microM for oxalic acid, 48 nM to 10 microM for succinic acid, and 6 nM to 10 microM for aconitic acid. Quantification of the analytes in soil-related samples was performed via external calibration of the entire procedure utilizing (13)C-labeled oxalic and citric acid as internal standards. The robustness of the method was tested with soil extracts and samples from hydroponic experiments. The latter concerned the regulation of phosphorus solubilization via plant root exudation of citric, malic, and oxalic acid.
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