Related Experiment Video
Updated: Jun 10, 2026

09:14
Examination of Proteins Bound to Nascent DNA in Mammalian Cells Using BrdU-ChIP-Slot-Western Technique
Published on: January 14, 2016
Chromatin dynamics mediated by histone modifiers and histone chaperones in postreplicative recombination
Hirohito Endo1, Satoshi Kawashima, Lui Sato
1Tohoku University, Aramaki, Aoba-ku, Sendai, Miyagi, Japan.
Genes to Cells : Devoted to Molecular & Cellular Mechanisms
|August 20, 2010
Summary
Histone H3 Lys56 acetylation is crucial for postreplicative homologous recombination in eukaryotes. This process involves histone chaperones and modifiers, revealing new insights into DNA repair mechanisms.
Area of Science:
- Molecular Biology
- Epigenetics
- DNA Repair
Background:
- Eukaryotic chromatin regulation involves histone modification enzymes, remodeling complexes, and chaperones in DNA-dependent reactions.
- While transcription in chromatin is well-studied, regulation of other DNA-dependent reactions, like postreplicative homologous recombination, remains unclear.
Purpose of the Study:
- To investigate the role of histone modifications and chaperones in regulating postreplicative homologous recombination.
- To elucidate the mechanism by which histone H3 Lys56 acetylation influences sister chromatid recombination.
Main Methods:
- Analysis of histone H3 Lys56 acetylation mediated by histone acetyltransferase Rtt109 and histone chaperone Cia1/Asf1.
- Investigation of recombination in cia1/asf1-V94R mutants and cells with defects in histone chaperone CAF-1.
- Assessment of DNA lesions in CAF-1 defective cells related to the Rtt101-Mms1-Mms22 ubiquitin ligase complex.
Main Results:
- Histone H3 Lys56 acetylation is essential for postreplicative sister chromatid recombination.
- The cia1/asf1-V94R mutant, lacking histone binding and chaperone activities, failed to promote this recombination.
- Defects in histone chaperone CAF-1 increased acetylated H3-K56-dependent recombination and associated DNA lesions.
Conclusions:
- Histone H3 Lys56 acetylation, regulated by Rtt109 and Cia1/Asf1, is a key requirement for postreplicative homologous recombination.
- Histone chaperones like Cia1/Asf1 and CAF-1 play multifaceted roles in controlling this recombination pathway.
- These findings establish a framework for understanding how histone modifiers and chaperones orchestrate postreplicative recombination.
Related Concept Videos
Crossing Over
Crossing over is the exchange of genetic information between homologous chromosomes during prophase I of meiosis I. Genetic recombination gives rise to allelic diversity in the newly formed daughter cells. In humans, crossing over produces genetically distinct haploid egg and sperm cells that undergo fertilization to produce unique offspring. Before cell division starts, the germ cell’s chromosome(s) undergo duplication in the S phase of the cell cycle. As the cells enter prophase I, duplicated...
Duplication of Chromatin Structure
The process of chromosome duplication during cell division requires genome-wide disruption and re-assembly of chromatin. The chromatin structure must be accurately inherited, reassembled, and maintained in the daughter cells to ensure lineage propagation.
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
Spreading of Chromatin Modifications
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Writers
The writer is an enzyme that can...
Nucleosome Remodeling
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Homologous Recombination
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Homologous Recombination
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...

