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Related Concept Videos

X-ray Crystallography02:18

X-ray Crystallography

The size of the unit cell and the arrangement of atoms in a crystal may be determined from measurements of the diffraction of X-rays by the crystal, termed X-ray crystallography.
Diffraction
Diffraction is the change in the direction of travel experienced by an electromagnetic wave when it encounters a physical barrier whose dimensions are comparable to those of the wavelength of the light. X-rays are electromagnetic radiation with wavelengths about as long as the distance between neighboring...
Determination of Crystal Structures01:29

Determination of Crystal Structures

In the late 1800s, the revelation that light extended beyond visible wavelengths led to the discovery of X-rays by Wilhelm Roentgen. Recognized as high-energy electromagnetic radiation with short wavelengths, X-rays prompted exploration into their interaction with crystals. Max von Laue proposed in 1912 that the periodic arrangement of atoms, ions, or molecules in crystals would cause them to diffract X-rays, a hypothesis confirmed through experiments with copper sulfate and zinc sulfide...
Crystal Density01:19

Crystal Density

The crystal lattice structure of a material allows us to determine how many molecules exist in its unit cell. With this information, alongside the unit-cell parameters - three distance parameters (a, b, c) and three angular parameters (α, β, γ).Density (ρ) = (Z × M) / (a × b × c × NA)where:Z is the number of formula units per unit cellM is the molar mass of the substancea, b, and c are the edge lengths of the unit cellNA is Avogadro’s numberFor a simple cubic lattice, atoms are located only at...
Law of Rational Indices01:29

Law of Rational Indices

The Law of rational indices is a fundamental principle in the field of crystallography. According to this law, the intercepts of a crystal face along the crystallographic axes (the three-dimensional axes along which a crystal is measured) can be expressed as either equivalent to the unit intercepts (a, b, c) or simple whole number multiples of them. These multiples are typically denoted as na, n'b, and n''c, where n, n', and n'' are simple whole numbers.To illustrate, consider a crystal with...
Imperfections in Crystal Structure: Stoichiometric Point Defects01:26

Imperfections in Crystal Structure: Stoichiometric Point Defects

Schottky defects arise when some lattice points in a crystal, such as those in NaCl, remain unoccupied, creating lattice vacancies without disturbing the overall electrical neutrality of the crystal. This defect is common in ionic crystals where the positive and negative ions are similar in size, as seen in sodium chloride and cesium chloride. The presence of Schottky defects enables the crystal to conduct electricity to a small extent through an ionic mechanism. Electric fields cause nearby...
Diffusion01:12

Diffusion

Diffusion is the passive movement of substances down their concentration gradients—requiring no expenditure of cellular energy. Substances, such as molecules or ions, diffuse from an area of high concentration to an area of low concentration in the cytosol or across membranes. Eventually, the concentration will even out, with the substance moving randomly but causing no net change in concentration. Such a state is called dynamic equilibrium, which is essential for maintaining overall...

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Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level
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Diffusion-equation method for crystallographic figure of merits.

Anders J Markvardsen1, William I F David

  • 1ISIS Facility, Rutherford Appleton Laboratory, Chilton, Oxon OX11 0QX, UK. anders.markvardsen@stfc.ac.uk

Acta Crystallographica. Section A, Foundations of Crystallography
|August 20, 2010
PubMed
Summary

This study introduces a diffusion equation method for global optimization in crystallography, enhancing powder diffraction structure solution. The computationally efficient approach offers new possibilities for crystallographic structure determination.

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Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level
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Area of Science:

  • Crystallography
  • Materials Science
  • Computational Chemistry

Background:

  • Global optimization is crucial for solving crystal structures from powder diffraction data.
  • Diffusion equations, known for heat propagation, have been explored for multimodal function optimization.

Purpose of the Study:

  • To present the mathematical foundations of a diffusion-equation-based global optimization method for crystallography.
  • To demonstrate the applicability of analytical diffusion equation solutions to crystallographic figure-of-merit functions.

Main Methods:

  • Developed analytical solutions for the diffusion equation applied to crystallographic figure-of-merit (FOM) functions.
  • Accounted for space-group symmetry and variations based on fixed or variable atomic coordinates.
  • Analyzed the computational efficiency of the diffusion-equation-based method.

Main Results:

  • Obtained analytical solutions for two key crystallographic FOM functions using the diffusion equation.
  • The method's computational cost is comparable to evaluating the FOM function itself.
  • Demonstrated that solutions can adapt to whether atomic coordinates are fixed or not.

Conclusions:

  • The diffusion-equation-based method provides a computationally efficient approach for crystallographic global optimization.
  • This method holds promise for advancing structure determination from powder diffraction data.
  • Enables the implementation of diffusion-equation methods within existing crystallographic algorithms.