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The obligatory intestinal folate transporter PCFT (SLC46A1) is regulated by nuclear respiratory factor 1
Nitzan Gonen1, Yehuda G Assaraf
1Fred Wyszkowski Cancer Research Laboratory, Faculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel.
Insights
Nuclear Respiratory Factor 1 (NRF-1) activates the proton-coupled folate transporter (PCFT) gene, crucial for folate absorption. This discovery links folate transport regulation to cellular energy pathways.
Area of Science:
- Molecular Biology
- Nutritional Biochemistry
- Genetics
Background:
- Folates are vital for DNA synthesis and cellular metabolism.
- The proton-coupled folate transporter (PCFT) is essential for intestinal folate absorption.
- PCFT mutations cause hereditary folate malabsorption, leading to severe health issues.
Purpose of the Study:
- To investigate the role of inducible trans-activators in PCFT gene expression.
- To identify regulatory elements and transcription factors controlling PCFT.
- To explore the connection between folate transport and cellular energy regulation.
Main Methods:
- Bioinformatic analysis to predict transcription factor binding sites.
- Electrophoretic mobility shift assays (EMSA) to confirm NRF-1 binding.
- Chromatin immunoprecipitation (ChIP) to validate NRF-1 interaction with the PCFT promoter.
- Luciferase reporter assays to assess promoter activity.
- Gene silencing techniques (siRNA) to evaluate NRF-1 function.
- Analysis of downstream gene expression.
Main Results:
- Three NRF-1 binding sites were identified in the PCFT promoter.
- NRF-1 directly binds to these sites, activating PCFT gene expression.
- Overexpression of NRF-1 increased PCFT mRNA levels, while NRF-1 inhibition decreased them.
- NRF-1 silencing also affected genes involved in folate metabolism and mitochondrial function.
Conclusions:
- NRF-1 is a key inducible transcriptional regulator of the PCFT gene.
- This finding establishes a link between folate transport, folate metabolism, and mitochondrial biogenesis.
- Understanding PCFT regulation by NRF-1 may offer new therapeutic strategies for folate malabsorption disorders.
Abstract:
Folates are essential vitamins that play a key role as one-carbon donors in a spectrum of biosynthetic pathways including RNA and DNA synthesis. The proton-coupled folate transporter (PCFT/SLC46A1) mediates obligatory intestinal folate absorption. Loss-of-function mutations in PCFT result in hereditary folate malabsorption, an autosomal recessive disorder characterized by very low folate levels in the blood and cerebrospinal fluid. Hereditary folate malabsorption manifests within the first months after birth with anemia, immune deficiency, and neurological deficits. Here we studied the role of inducible trans-activators of PCFT gene expression. Bioinformatics identified three putative nuclear respiratory factor 1 (NRF-1) binding sites in the minimal promoter. The following evidence establish that PCFT is an NRF-1-responsive gene; electrophoretic mobility shift assay showed NRF-1 binding to native but not mutant NRF-1 sites, whereas antibody-mediated supershift analysis and chromatin immunoprecipitation revealed NRF-1 binding to its consensus sites within the PCFT promoter. Moreover, mutational inactivation of individual or all NRF-1 binding sites resulted in 40-60% decrease in luciferase reporter activity. Consistently, overexpression of NRF-1 or a constitutively active NRF-1 VP-16 construct resulted in increased reporter activity and PCFT mRNA levels. Conversely, introduction of a dominant-negative NRF-1 construct markedly repressed reporter activity and PCFT mRNA levels; likewise, introduction of NRF-1 siRNA duplexes to cells resulted in decreased PCFT transcript levels. Moreover, NRF-1 silencing down-regulated genes encoding for key folate transporters and enzymes in folate metabolism. These novel findings identify NRF-1 as a major inducible transcriptional regulator of PCFT gene expression. The implications of this linkage between folate transport and metabolism with mitochondria biogenesis and respiration are discussed.
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