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Updated: Jun 10, 2026

Measurements of Physiological Stress Responses in C. Elegans
Published on: May 21, 2020
Conserved and distinct modes of CREB/ATF transcription factor regulation by PP2A/B56gamma and genotoxic stress
Naval P Shanware1, Lihong Zhan, John A Hutchinson
1Department of Pharmacology, Program in Molecular and Cellular Pharmacology and Molecular and Environmental and Toxicology Center, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, USA.
Abstract:
Activating transcription factor 1 (ATF1) and the closely related proteins CREB (cyclic AMP resonse element binding protein) and CREM (cyclic AMP response element modulator) constitute a subfamily of bZIP transcription factors that play critical roles in the regulation of cellular growth, metabolism, and survival. Previous studies demonstrated that CREB is phosphorylated on a cluster of conserved Ser residues, including Ser-111 and Ser-121, in response to DNA damage through the coordinated actions of the ataxia-telangiectasia-mutated (ATM) protein kinase and casein kinases 1 and 2 (CK1/2). Here, we show that DNA damage-induced phosphorylation by ATM is a general feature of CREB and ATF1. ATF1 harbors a conserved ATM/CK cluster that is constitutively and stoichiometrically phosphorylated by CK1 and CK2 in asynchronously growing cells. Exposure to DNA damage further induced ATF1 phosphorylation on Ser-51 by ATM in a manner that required prior phosphorylation of the upstream CK residues. Hyperphosphorylated ATF1 showed a 4-fold reduced affinity for CREB-binding protein. We further show that PP2A, in conjunction with its targeting subunit B56gamma, antagonized ATM and CK1/2-dependent phosphorylation of CREB and ATF1 in cellulo. Finally, we show that CK sites in CREB are phosphorylated during cellular growth and that phosphorylation of these residues reduces the threshold of DNA damage required for ATM-dependent phosphorylation of the inhibitory Ser-121 residue. These studies define overlapping and distinct modes of CREB and ATF1 regulation by phosphorylation that may ensure concerted changes in gene expression mediated by these factors.
Insights
DNA damage triggers phosphorylation of transcription factors ATF1 and CREB by ATM kinase. This dual regulation impacts their interaction with CREB-binding protein and gene expression, revealing distinct phosphorylation control mechanisms.
Area of Science:
- Molecular Biology
- Cellular Signaling
- Transcription Factor Regulation
Background:
- Activating transcription factor 1 (ATF1) and cyclic AMP response element binding protein (CREB) are bZIP transcription factors vital for cellular processes.
- Previous research indicated CREB phosphorylation at Ser-111 and Ser-121 in response to DNA damage via ATM, CK1, and CK2 kinases.
Purpose of the Study:
- To investigate the role of ATM kinase in DNA damage-induced phosphorylation of ATF1 and CREB.
- To elucidate the distinct phosphorylation patterns and regulatory mechanisms of ATF1 and CREB.
- To examine the impact of phosphorylation on ATF1 binding affinity and the antagonistic role of PP2A.
Main Methods:
- Western blotting to detect protein phosphorylation.
- Co-immunoprecipitation assays to assess protein interactions.
- Site-directed mutagenesis to study phosphorylation site function.
- Cellular assays to evaluate gene expression changes.
Main Results:
- DNA damage induces ATF1 phosphorylation by ATM, dependent on prior CK1/2 phosphorylation.
- Hyperphosphorylated ATF1 exhibits reduced binding affinity to CREB-binding protein.
- Protein phosphatase 2A (PP2A) antagonizes ATM and CK1/2-mediated phosphorylation of ATF1 and CREB.
- Pre-phosphorylation of CREB CK sites lowers the DNA damage threshold for ATM-dependent Ser-121 phosphorylation.
Conclusions:
- Overlapping and distinct phosphorylation-dependent regulatory pathways govern ATF1 and CREB.
- These mechanisms ensure coordinated gene expression changes mediated by ATF1 and CREB.
- The findings provide insights into the nuanced regulation of transcription factors in response to cellular stress.
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