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Updated: Jun 9, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Characterization of vancomycin-resistant Enterococcus faecium isolated from swine in three Michigan counties
Susan M Donabedian1, Mary Beth Perri, Nodira Abdujamilova
1Department of Medicine, Division of Infectious Diseases, Henry Ford Health System, Detroit, Michigan 48202, USA.
Vancomycin-resistant Enterococcus faecium (VREF) was found in pigs at Michigan county fairs, marking the first U.S. detection in food animals. This study highlights VREF
Area of Science:
- Microbiology
- Veterinary Science
- Public Health
Background:
- Vancomycin-resistant enterococci (VRE) are significant causes of hospital-acquired infections.
- VRE are uncommon in community settings and previously unidentified in U.S. food animals.
- Enterococcus faecium is a common pathogen, with vancomycin resistance posing a growing threat.
Purpose of the Study:
- To investigate the presence of VRE in humans and animals at Michigan county fairs.
- To characterize VRE isolates, including their resistance mechanisms and genetic relatedness.
Main Methods:
- Fecal specimens (n=360) from humans and various animals were collected from three Michigan county fairs.
- Samples were cultured on Enterococcosel agar with vancomycin (16 µg/ml).
- VRE isolates were confirmed using vancomycin Minimum Inhibitory Concentration (MIC) testing, vanA gene detection, Pulsed-field gel electrophoresis (PFGE), and Multilocus Sequence Typing (MLST).
Main Results:
- Vancomycin-resistant Enterococcus faecium (VREF) was isolated from six pigs; no VREF was found in humans or other animal species.
- All VREF isolates exhibited high-level vancomycin resistance (MIC ≥256 µg/ml) and carried the vanA gene.
- PFGE indicated high similarity (>80%) among VREF isolates, and MLST identified sequence types (ST5, ST6, ST185) belonging to clonal complex 5 (CC5).
Conclusions:
- This study reports the first identification of VRE in food animals in the United States, specifically among pigs in Michigan.
- The findings demonstrate the dissemination of genetically related VREF strains within pig populations.
- The presence of VREF in pigs raises concerns about potential transmission pathways and the broader One Health implications.
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