DNA-triggered aggregation of copper, zinc superoxide dismutase in the presence of ascorbate

Jun Yin1, Si Hu, Wei Jiang

  • 1Key Laboratory of Pesticide and Chemical Biology, Ministry of Education, and School of Chemistry, Central China Normal University, Wuhan, China.

Plos One
|September 3, 2010
PubMed

Insights

Oxidative damage to wild-type copper, zinc superoxide dismutase (SOD1) can lead to protein aggregation. DNA accelerates this oxidative aggregation by neutralizing positive charges on SOD1, revealing key molecular forces in protein aggregation.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Protein Chemistry

Background:

  • The oxidative damage hypothesis suggests mutant and wild-type (WT) copper, zinc superoxide dismutase (SOD1) can cause cellular damage.
  • It remains unclear if SOD1 oxidative damage contributes to SOD1 aggregate formation.

Purpose of the Study:

  • To investigate the oxidative aggregation of WT SOD1 under neutral conditions with ascorbate (Asc) and DNA.
  • To understand the role of oxidation and DNA in SOD1 aggregation.

Main Methods:

  • Exposure of WT SOD1 to ascorbate and DNA under neutral conditions.
  • Analysis of SOD1 oxidation, DNA binding affinity, hydrophobicity, and aggregation.
  • Investigation of charge neutralization's role in aggregation.

Main Results:

  • WT SOD1 was oxidized by ascorbate.
  • Oxidized SOD1 exhibited increased affinity for DNA and enhanced aggregation.
  • DNA significantly accelerated SOD1 oxidative aggregation.
  • A correlation was found between oxidation, hydrophobicity, and aggregation, with DNA binding neutralizing positive charges.

Conclusions:

  • Oxidative damage to WT SOD1, particularly in the presence of DNA, promotes protein aggregation.
  • DNA binding, through charge neutralization, is a critical step in SOD1 oxidative aggregation.
  • This study elucidates molecular forces driving protein aggregation, relevant to SOD1-related diseases.

Related Concept Videos

Electron Transport Chain: Complex III and IV01:43

Electron Transport Chain: Complex III and IV

During the electron transport chain, electrons from NADH and FADH2 are first transferred to complexes I and II, respectively. These two complexes then transfer the electrons to ubiquinol, which carries them further to complex III. Complex III passes the electrons across the intermembrane space to Cyt c, which carries them further to complex IV. Complex IV donates electrons to oxygen and reduces it to water. As electrons pass through complexes I, III, and IV, the energy released aids the pumping...
Protein Modifications in the RER01:26

Protein Modifications in the RER

Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal sequences.
Formation of Complex Ions03:45

Formation of Complex Ions

A type of Lewis acid-base chemistry involves the formation of a complex ion (or a coordination complex) comprising a central atom, typically a transition metal cation, surrounded by ions or molecules called ligands. These ligands can be neutral molecules like H2O or NH3, or ions such as CN− or OH−. Often, the ligands act as Lewis bases, donating a pair of electrons to the central atom. These types of Lewis acid-base reactions are examples of a broad subdiscipline called coordination...
EDTA: Auxiliary Complexing Reagents01:26

EDTA: Auxiliary Complexing Reagents

EDTA titrations are usually carried out in highly basic conditions, where the fully deprotonated form of EDTA, Y4−, actively complexes with the free metal ions in the solution. Several metal ions precipitate as hydrous oxide (hydroxides, oxides, or oxyhydroxides) under these conditions, lowering the concentration of free metal ions in the solution. For this reason, auxiliary complexing agents or ligands such as ammonia, tartrate, citrate, or triethanolamine are used in EDTA titrations to...