Related Experiment Video
Updated: Jun 9, 2026

The Soft Agar Colony Formation Assay
Published on: October 27, 2014
WNT pathway in oral cancer: epigenetic inactivation of WNT-inhibitors
1Department of Surgical Sciences, Section of Anatomic Pathology and Cytopathology, University of Foggia, Foggia, Italy.
Abstract:
Epigenetic DNA methylations plays an important role in oral carcinogenesis. The soluble frizzled receptor protein (SFRP) family together with WIF-1 and DKK-3 encodes antagonists of the WNT pathway. Silencing of these genes leads to constitutive WNT signalling. Because aberrant expression of beta-catenin might be associated with the epigenetic inactivation of WNT inhibitors, we analyzed, in a collection of primary OSCC with matched normal oral mucosa, the methylation status of a complete panel of genes, SFRP-1, SFRP-2, SFRP-4, SFRP-5, WIF-1, DKK-3, that are involved directly and indirectly in WNT pathway, in order to demonstrate WNT-pathway activation in the absence of beta-catenin and/or APC/Axin mutations during oral carcinogenesis. Methylation-specific PCR (MSP) was performed to study inactivation of SFRP-1, SFRP-2, SFRP-4, SFRP-5, WIF-1, DKK-3 genes in 37 cases of paraffin embedded oral cancer. This study showed that the methylation is an important epigenetic alteration in oral cancer. In particular, SFRP-2, SFRP-4, SFRP-5, WIF-1, DKK-3 revealed methylation status of their promoter in OSCC, whereas SFRP-1 showed demethylation in cancer. Fisher's exact test revealed statistically significant results (p<0.05) for all genes. The Wald test confirmed the statistically significant association between SFRP2-4-5 gene methylation and OSCC (p<0.05). SFRP-1 was also characterized by a different statistically significant epigenetic behaviour, because of it was demethylated in cancer (p<0.05). Statistical regression test showed high levels of sensitivity, specificity and accuracy for SFRP genes, while WIF-1 and DKK-3 have reportedly high specificity, moderate accuracy but low sensitivity. This study suggests that a cause of catenin delocalization in oral cancer could be due to WNT pathway activation, by epigenetic alterations of SFRP, WIF-1 and DKK-3 genes.
Insights
Epigenetic DNA methylation silences WNT pathway inhibitors like SFRP genes in oral cancer. SFRP gene promoter methylation is a key epigenetic alteration in oral squamous cell carcinoma (OSCC).
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Epigenetic DNA methylation is crucial in oral carcinogenesis.
- The soluble frizzled receptor protein (SFRP) family, WIF-1, and DKK-3 antagonize the WNT pathway.
- Gene silencing of these antagonists leads to constitutive WNT signaling, potentially driving oral cancer.
Purpose of the Study:
- To investigate the methylation status of SFRP-1, SFRP-2, SFRP-4, SFRP-5, WIF-1, and DKK-3 genes in oral squamous cell carcinoma (OSCC).
- To determine the association between the epigenetic inactivation of WNT inhibitors and WNT pathway activation in oral carcinogenesis.
- To assess the diagnostic potential of these genes in OSCC detection.
Main Methods:
- Analysis of promoter methylation status of SFRP-1, SFRP-2, SFRP-4, SFRP-5, WIF-1, and DKK-3 genes.
- Methylation-specific PCR (MSP) was employed on 37 primary OSCC samples and matched normal oral mucosa.
- Statistical analyses including Fisher's exact test, Wald test, and regression tests were performed.
Main Results:
- Promoter methylation was observed in SFRP-2, SFRP-4, SFRP-5, WIF-1, and DKK-3 genes in OSCC samples.
- SFRP-1 showed significant demethylation in cancer tissues.
- SFRP genes demonstrated high sensitivity, specificity, and accuracy for OSCC detection, while WIF-1 and DKK-3 showed high specificity but lower sensitivity.
Conclusions:
- Epigenetic alterations, specifically promoter methylation of SFRP, WIF-1, and DKK-3 genes, are significant events in oral carcinogenesis.
- WNT pathway activation, driven by the epigenetic silencing of these inhibitors, likely contributes to oral cancer development.
- SFRP gene methylation status serves as a potential biomarker for OSCC diagnosis.
Related Concept Videos
Canonical Wnt Signaling Pathway
Canonical Wnt Signaling Pathway
Non-Canonical Wnt Signaling Pathways
Non-Canonical Wnt Signaling Pathways
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...