Related Experiment Video
Updated: Jun 8, 2026

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Lack of p16 gene mutations in gastric cancers in Kashmir
Sheikh Alina Bashir1, Arshad Ahmad Pandith, Adfar Yousuf
1Department of Biotechnology Jamia Hamdard, Hamdard Nagar New Delhi, India.
Background And Aim:
The focus of the study was to investigate the frequencies of homozygous deletions and mutations of p16 gene in gastric carcinomas in the Kashmiri population.
Methods:
A total of 84 gastric carcinoma patients were screened by the single strand conformation polymorphism (SSCP) technique and later by DNA sequencing to detect mutations of the p16 gene. Also PCR was applied further to further detect any homozygous deletions.
Results:
SSCP and DNA sequencing performed encompassing all the three exons of p16 gene could not detect any mutations in any ofl 84 cases. Though we could observe mobility shifts in SSCP of two samples, subsequent DNA sequencing did not show any mutation. Further PCR could not detect any homozygous deletion in P16 in any case.
Conclusion:
Though Kashmir is a high incidence area of gastric carcinomas, p16gene mutations /or deletions do not appear to be involved.
Insights
Gastric carcinoma is common in Kashmir, but this study found no p16 gene mutations or deletions in 84 patients. The p16 gene does not appear to be a factor in these gastric cancers.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Gastric carcinoma presents a high incidence in the Kashmiri population.
- The p16 gene is a tumor suppressor gene frequently altered in various cancers.
- Investigating genetic alterations in gastric cancer is crucial for understanding its pathogenesis.
Purpose of the Study:
- To determine the frequency of p16 gene mutations and homozygous deletions in gastric carcinomas.
- To assess the role of the p16 gene in gastric cancer development within the Kashmiri population.
Main Methods:
- Screening of 84 gastric carcinoma patients using Single Strand Conformation Polymorphism (SSCP) and DNA sequencing.
- Utilizing Polymerase Chain Reaction (PCR) to detect homozygous deletions of the p16 gene.
Main Results:
- No mutations in the p16 gene were detected in any of the 84 gastric carcinoma cases.
- While mobility shifts were observed in SSCP for two samples, DNA sequencing confirmed no mutations.
- PCR analysis did not reveal any homozygous deletions of the p16 gene in the studied cases.
Conclusions:
- Despite high gastric carcinoma rates in Kashmir, alterations in the p16 gene (mutations or deletions) do not seem to be involved.
- The p16 gene is unlikely to be a significant contributor to gastric carcinogenesis in this specific population.
Related Concept Videos
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...
Cancers Originate from Somatic Mutations in a Single Cell
Cancers Originate from Somatic Mutations in a Single Cell
Abnormal Proliferation
The Retinoblastoma Gene
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
