Identification of genes potentially involved in the increased risk of malignancy in NF1-microdeleted patients
Eric Pasmant1, Julien Masliah-Planchon, Pascale Lévy
1Université Paris Descartes, Faculté des Sciences Pharmaceutiques et Biologiques, Paris, France. eric.pasmant@gmail.com
Abstract:
Patients with NF1 microdeletion develop more neurofibromas at a younger age, and have an increased risk of malignant peripheral nerve sheath tumors (MPNSTs). We postulated that the increased risk of malignancy could be due to inactivation, in addition to NF1, of a second tumor suppressor gene located in the typical 1.4-Mb microdeletion found in most of the microdeleted patients. We investigated the expression of NF1, the other 16 protein-coding genes and the 2 microRNAs located in the 1.4-Mb microdeletion by means of real-time quantitative reverse-transcription polymerase chain reaction (RT-PCR) in a large series of human dermal and plexiform neurofibromas and MPNSTs. Five genes were significantly upregulated: OMG and SUZ12 in plexiform neurofibromas and ATAD5, EVI2A and C17orf79 in MPNSTs. More interestingly, two genes were significantly downregulated (RNF135 and CENTA2) in tumor Schwann cells from MPNST biopsies and in MPNST cell lines. This study points to the involvement of several genes (particularly RNF135 and CENTA2) in the increased risk of malignancy observed in NF1-microdeleted patients.
Insights
Patients with NF1 microdeletion have higher risks for tumors. This study found specific gene expression changes, particularly RNF135 and CENTA2 downregulation, linked to increased malignancy risk in these patients.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Neurofibromatosis type 1 (NF1) microdeletion is associated with earlier onset of neurofibromas and a higher risk of malignant peripheral nerve sheath tumors (MPNSTs).
- The increased malignancy risk may stem from the inactivation of additional tumor suppressor genes within the commonly deleted 1.4-Mb region alongside NF1.
Purpose of the Study:
- To investigate the expression levels of genes and microRNAs within the 1.4-Mb NF1 microdeletion region in various neurofibroma types and MPNSTs.
- To identify specific genes potentially contributing to the elevated malignancy risk in NF1 microdeletion patients.
Main Methods:
- Real-time quantitative reverse-transcription polymerase chain reaction (RT-PCR) was employed.
- Gene expression was analyzed in human dermal neurofibromas, plexiform neurofibromas, MPNSTs, and MPNST cell lines.
Main Results:
- Five genes (OMG, SUZ12, ATAD5, EVI2A, C17orf79) showed significant upregulation in specific tumor types (plexiform neurofibromas and MPNSTs).
- Two genes, RNF135 and CENTA2, were significantly downregulated in tumor Schwann cells from MPNSTs and MPNST cell lines.
Conclusions:
- The study implicates several genes within the NF1 microdeletion region in the pathogenesis of MPNSTs.
- RNF135 and CENTA2 downregulation are particularly highlighted as potential contributors to the increased malignancy risk observed in NF1-microdeleted patients.
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