Related Experiment Video
Updated: Jun 8, 2026

07:26
Visualizing Methane-Cycling Microbial Dynamics in Coastal Wetlands
Published on: January 31, 2025
The methane cycle in ferruginous Lake Matano.
S A Crowe1, S Katsev, K Leslie
1Earth and Planetary Sciences, McGill University, Montréal, Québec, Canada.
Geobiology
|September 22, 2010
Summary
In Lake Matano, methane (CH₄) fuels microbial life and carbon cycling, even in iron-rich waters. Methanogens and methanotrophs likely played key roles in ancient Archean oceans.
Area of Science:
- Geomicrobiology
- Biogeochemistry
- Environmental Science
Background:
- Lake Matano, Indonesia, is a unique ferruginous basin with abundant iron oxides.
- Over 50% of organic matter is degraded by methanogenesis, despite high iron.
- High concentrations of methane (CH₄) exist in anoxic bottom waters.
Purpose of the Study:
- Investigate methane cycling and its microbial drivers in Lake Matano.
- Determine the role of methanogenesis and methane oxidation in this iron-rich environment.
- Explore implications for early Earth ecosystems.
Main Methods:
- Analysis of dissolved inorganic carbon (ΣCO₂) and carbon isotopes (δ¹³C).
- Thermodynamic modeling of microbial metabolisms.
- Flux calculations for iron and manganese.
- 16S rRNA gene cloning to identify microbial communities.
Main Results:
- Methane is oxidized near the pycnocline, with evidence of anaerobic oxidation.
- Anaerobic methane oxidation is likely coupled to iron and manganese reduction.
- Methanogens capable of acetoclastic and hydrogenotrophic pathways were identified.
- Methane plays a significant role in carbon cycling in this Fe-rich system.
Conclusions:
- Lake Matano's microbial ecosystems provide insights into potential Archean Ocean conditions.
- Methanogens and methanotrophs may have been crucial components of early Earth's marine ecosystems.
- Iron-rich environments support significant methane cycling and microbial activity.
Related Concept Videos
Microbes and Other Elemental Cycles
Microbial activity plays a pivotal role in the biogeochemical cycling of iron and manganese, especially at the redox gradients characteristic of stratified aquatic environments. These cycles are driven by microbial transformations between oxidized and reduced forms of the metals, allowing organisms to exploit them for metabolic energy and structural purposes.Iron Cycling Across Redox GradientsIn neutral, oxygen-rich surface waters, iron is predominantly found in its oxidized, insoluble ferric...
Microbes and Methanogenesis
Methanogenesis is a critical microbial process in anaerobic ecosystems responsible for the biological production of methane, a potent greenhouse gas and valuable biofuel. This metabolic pathway is primarily facilitated by methanogenic archaea, which thrive in anoxic environments such as wetlands, sediments, and animal gastrointestinal tracts. The absence of oxygen in these habitats prevents aerobic respiration, thereby favoring alternative biochemical pathways for organic matter degradation.In...
Microbes and the Carbon Cycle
The carbon cycle is a fundamental Earth process involving the transfer of carbon among the biosphere, lithosphere, atmosphere, and hydrosphere. It plays a critical role in regulating the planet’s climate and supporting life by cycling carbon through various chemical forms and reservoirs. Carbon primarily circulates as carbon dioxide (CO₂), representing its oxidized form, while reduced forms such as methane (CH₄) and organic compounds also play essential roles.Microbial activity is central to...
Metabolism of Chemolithotrophs
Chemolithotrophs are microorganisms that obtain energy by oxidizing inorganic molecules such as hydrogen gas (H₂), ammonia (NH₃), reduced sulfur compounds (H₂S, S²⁻), and ferrous iron (Fe²⁺). Unlike heterotrophic organisms that rely on organic carbon, chemolithotrophs transfer electrons from these inorganic donors to the electron transport chain (ETC), generating a proton motive force (PMF) that drives ATP synthesis through oxidative phosphorylation. However, because inorganic electron donors...
Microbes and Climate Change
Microorganisms are pivotal agents in Earth's biogeochemical cycles, significantly influencing climate dynamics through their metabolic activities. These microbes modulate the levels of key greenhouse gases by both contributing to and helping mitigate climate change.Microbial Contributions to Greenhouse Gas EmissionsRising global temperatures accelerate microbial metabolism, which, in turn, speeds up the decomposition of organic matter. This process releases carbon dioxide (CO₂) through...
The Sulfur Cycle
Sulfur, an important element in the chemical makeup of proteins, is recycled through the atmosphere and aquatic and terrestrial environments. Found in the atmosphere as sulfur dioxide (SO2), sulfur is released by decaying organisms, weathered rocks, geothermal vents, volcanos, and burning fossil fuels. It is deposited into the ecosystem, cycled through the biotic community, and either released back into the atmosphere as gas or deposited in marine sediment for long-term storage and eventual...

