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Evidence for a predisposing background for CAG expansion leading to HTT mutation in a Chinese population
Mingyi Ma1, Yuan Yang, Huifang Shang
1Department of Medical Genetics, West China Hospital and State Key Laboratory of Biotherapy, Sichuan University, Gaopeng street, Keyuan Road 4, Chengdu, Sichuan 610041, China.
Insights
The (CCG)10 allele in the HTT gene may predispose Chinese populations to Huntington's disease (HD) by increasing CAG repeat instability. This finding suggests a genetic basis for HD prevalence differences between Chinese and European populations.
Area of Science:
- Genetics
- Human Molecular Genetics
- Population Genetics
Background:
- Huntington's disease (HD) is caused by CAG repeat expansions in the HTT gene.
- The instability of these CAG repeats is influenced by flanking sequences, such as CCG repeats.
- Understanding the genetic background of CAG repeat instability is crucial for explaining population-specific HD prevalence.
Purpose of the Study:
- To investigate the predisposing genetic background for CAG repeat instability of the HTT gene in a Chinese population.
- To compare the frequencies of CCG repeat alleles between HD patients and controls.
- To identify specific CCG repeat alleles or haplotypes associated with increased CAG expansion.
Main Methods:
- Genotyping and haplotyping of CAG and CCG repeats in the HTT gene were performed using capillary electrophoresis and DNA sequencing.
- The study included 32 unrelated HD patients and 95 non-HD controls of Han Chinese origin.
- Frequencies of CCG repeats and mean CAG repeat sizes were compared between mutant and wild-type HTT genes and across different CCG repeat backgrounds.
Main Results:
- Five CCG repeat alleles were identified, with four found in HD chromosomes.
- (CCG)10 showed a higher frequency in mutant HTT genes compared to wild-type genes.
- The highest mean CAG repeat size was observed in individuals with the (CCG)10 background, and a (CAG)32-(CCG)10 haplotype was identified in controls.
Conclusions:
- HTT mutations likely have multiple origins in the Chinese population.
- The (CCG)10 allele may represent a predisposing background for CAG expansion in Chinese populations, potentially leading to new HTT mutations.
- Lower HD prevalence in Chinese compared to Europeans may be due to a lower frequency of predisposing haplotypes for CAG instability, not an absence of such backgrounds.
Objective:
To investigate the predisposing background for the instability of CAG expansions of the HTT gene in a Chinese population.
Methods:
Genotyping and haplotyping of CAG and CCG repeats of the HTT gene were carried out in 32 unrelated HD patients and 95 non-HD control individuals of Han origin, using capillary electrophoresis and DNA sequencing. The frequencies of different CCG repeats were compared between mutant and wild-type HTT genes. In controls, the comparison of the mean CAG repeat size was performed among different CCG repeats.
Results:
A total of five alleles of CCG repeats were distinguished, in which four were present in HD chromosomes. In the CCG alleles, (CCG)10 showed a higher frequency in mutant HTT genes relative to wild-type ones, and the highest mean CAG repeat size was observed in the (CCG)10 background. Additionally, a haplotype of (CAG)32-(CCG)10 was found in the control group.
Conclusion:
Our findings indicate that HTT mutation is likely of multiple origins in the Chinese population. Among the origins, more new HTT mutations may arise from the (CCG)10 than from other CCG alleles, which suggests that the (CCG)10 allele may represent a predisposing background for CAG expansion in Chinese populations. Therefore, in comparison with Europeans, the significantly lower prevalence of Huntington's disease in Chinese individuals may not be due to the absence of the predisposing background for CAG expansion but instead may partly result from the lower frequency of the predisposing haplotype for CAG instability in the population.
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