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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Therapeutic potential of antisense oligodeoxynucleotides in downregulating p53 oncogenic mutations in cancers
Zhigang Xie1, Wee Joo Chng, Kian Ghee Tay
1Cancer Science Institute of Singapore, National University of Singapore, Singapore 117456, Singapore.
Purpose Of Work:
mutation of the p53 gene is the most common genetic alteration in human cancers. Our study proposes to rationally design a p53 antisense oligonucleotide (ASO) repository, which contains a series of ASOs containing single nucleotide differences to discriminate between each mutant and wild type (WT) p53. The Sfold software was used to predict target-accessibility and we designed an initial series of antisense oligonucleotides (ASO) that target the p53 mutants A161T, R175H and R249S. Western-blot analysis indicated that ASOs strongly inhibited the expression of p53 mutants in a panel of human tumor cell lines (SNU-449, SK-BR-3 and PLC/PRF/5) while having little effect on the expression of WT p53 (HepG2 cells). In three cancer lines harboring each of the p53 mutations, mutant-specific ASO treatment led to a dose-dependent inhibition of cell growth, cell viability, colony formation and invasion, and expression of mutant p53-dependent survival proteins. Our preliminary results indicate that a single nucleotide difference in ASOs can discriminate between mutant and WT p53. These observations support the hypothesis that a p53 ASO repository can be a potentially valuable tool to knock down oncogenic mutant p53 and warrant the testing of a p53 ASO repository in in vivo settings.
Insights
Researchers designed p53 antisense oligonucleotides (ASOs) that precisely target mutant p53 genes. These ASOs effectively inhibited cancer cell growth and survival, demonstrating potential for targeted cancer therapy.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The p53 gene is frequently mutated in human cancers, driving tumor development.
- Targeting specific p53 mutations offers a potential therapeutic strategy.
Purpose of the Study:
- To design and validate a repository of p53 antisense oligonucleotides (ASOs) capable of discriminating between mutant and wild-type (WT) p53.
- To assess the efficacy of these ASOs in inhibiting mutant p53 expression and cancer cell progression.
Main Methods:
- Utilized Sfold software for predicting target accessibility of ASOs.
- Designed a series of ASOs targeting specific p53 mutants (A161T, R175H, R249S).
- Employed Western-blot analysis to evaluate ASO inhibition of p53 expression in human tumor cell lines.
Main Results:
- ASOs demonstrated potent inhibition of mutant p53 expression in various cancer cell lines.
- ASOs showed minimal impact on wild-type p53 expression.
- Treatment with mutant-specific ASOs led to dose-dependent reduction in cancer cell growth, viability, colony formation, and invasion.
Conclusions:
- A single nucleotide difference in ASOs can effectively distinguish between mutant and WT p53.
- A p53 ASO repository shows promise as a tool for knocking down oncogenic mutant p53.
- Further in vivo studies are warranted to validate the therapeutic potential of p53 ASO repositories.
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