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Published on: October 28, 2021
Fusarium culmorum is a single phylogenetic species based on multilocus sequence analysis
Friday Obanor1, G Erginbas-Orakci, B Tunali
1CSIRO Plant Industry, 306 Carmody Road, St Lucia, Queensland 4067, Australia. Friday.obanor@csiro.au
Fusarium culmorum, a wheat and barley pathogen, shows significant genetic exchange across regions, indicating a highly recombining species. Its evolutionary history reveals a single phylogenetic species with widespread genotypes, possibly due to trade and dispersal.
Area of Science:
- Plant Pathology
- Evolutionary Biology
- Mycology
Background:
- Fusarium culmorum is a significant pathogen affecting wheat and barley, causing head blight and crown rot in temperate regions.
- Understanding the evolutionary history of F. culmorum is crucial for managing its impact on global agriculture.
Purpose of the Study:
- To investigate the evolutionary history and population structure of Fusarium culmorum.
- To analyze genetic diversity and gene flow among F. culmorum isolates from different geographic locations.
Main Methods:
- Partial sequencing of single-copy nuclear genes: translation elongation factor 1-α (TEF), reductase (RED), and phosphate permease (PHO).
- Phylogenetic analysis using multilocus sequence (MLS) data with Bayesian inference and maximum parsimony.
- Analysis of fixation index and gene flow to assess genetic exchange.
Main Results:
- Phylogenetic analysis confirmed F. culmorum as a single phylogenetic species with no significant linkage disequilibrium or geographic lineage development.
- MLS and TEF/RED gene analyses differentiated the four Fusarium species and identified three to four groups within F. culmorum.
- PHO gene sequencing did not fully resolve species, but fixation index and gene flow indicated substantial genetic exchange between geographically distant isolates.
- Mating type genes were equally present, suggesting the potential for sexual reproduction.
Conclusions:
- Fusarium culmorum exhibits a lack of strong lineage structure, suggesting frequent recombination and widespread genotype distribution.
- International trade, tourism, and long-range dispersal likely contribute to the homogenization of F. culmorum populations.
- The potential for sexual reproduction in F. culmorum warrants further investigation regarding its epidemiological significance.
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