Microautophagy of the nucleus coincides with a vacuolar diffusion barrier at nuclear-vacuolar junctions

Rosie Dawaliby1, Andreas Mayer

  • 1Département de Biochimie, Université de Lausanne, Chemin des Boveresses 155, 1066 Epalinges, Switzerland.

Insights

The study reveals how yeast nuclei invaginate into vacuoles through nucleus-vacuole (NV) junctions, a process called piecemeal microautophagy of the nucleus (PMN). This process is driven by the vacuolar membrane

Area of Science:

  • Cell Biology
  • Molecular Biology
  • Autophagy Research

Background:

  • Nuclei and vacuoles interact in yeast via nucleus-vacuole (NV) junctions.
  • Nutrient restriction triggers piecemeal microautophagy of the nucleus (PMN), where nuclear material is released into vacuoles.

Purpose of the Study:

  • To elucidate the mechanisms and molecular players involved in the invagination and vesicle release at NV junctions during PMN.
  • To investigate the role of the electrochemical gradient and lipid metabolism in regulating NV junction dynamics.

Main Methods:

  • Utilized yeast genetics and live-cell imaging to study NV junction formation and function.
  • Investigated the impact of electrochemical gradients and specific proteins (Nvj1p, Vac8p, Osh1p, Tsc13p) on NV junction dynamics.
  • Analyzed the role of V-ATPase and VTC complex in PMN vesicle formation.

Main Results:

  • The electrochemical gradient across the vacuolar membrane drives NV junction invagination.
  • NV junctions form a diffusion barrier excluding V-ATPase but including the VTC complex.
  • Lipid-modifying enzymes and specific proteins are crucial for establishing the diffusion barrier and PMN vesicle formation.

Conclusions:

  • NV junction formation involves two steps: initial contact via Nvj1p/Vac8p and subsequent invagination/vesicle formation driven by electrochemical potential and lipid metabolism.
  • The study identifies key regulators of PMN, offering insights into nuclear-vacuolar transport and autophagy.

Related Concept Videos

Autophagy01:27

Autophagy

Autophagy is a self-digesting process by which a cell protects itself from threats both within and outside the cell, ranging from abnormal proteins to invading bacteria. In this process, obsolete components of the cell and invading microbes are degraded by hydrolytic enzymes active in an acidic environment of the lysosomal lumen.
An autophagic pathway consists of a series of signaling events activated in response to diverse stress and physiological conditions such as food deprivation,...
Nuclear Protein Sorting01:34

Nuclear Protein Sorting

Nuclear protein sorting is the selective trafficking of histones, polymerases, gene regulatory proteins into the nucleus and exporting RNAs and ribosomes to the cytosol. It is a tightly controlled process that regulates gene expression within a cell.
Proteins targeted to the nucleus carry nuclear localization signals or NLS recognized by import receptors in the cytosol. Similarly, proteins with nuclear export signals are recognized by export receptors. Import and export receptors are...
Eukaryotic Compartmentalization01:37

Eukaryotic Compartmentalization

One of the distinguishing features of eukaryotic cells is that they contain membrane-bound organelles, such as the nucleus and mitochondria, that carry out specialized functions. Since biological membranes are only selectively permeable to solutes, they help create a compartment with controlled conditions inside an organelle. These microenvironments are tailored to the organelle's specific functions and help isolate them from the surrounding cytosol.
For example, lysosomes in the animal cells...
Eukaryotic Compartmentalization01:46

Eukaryotic Compartmentalization

One of the distinguishing features of eukaryotic cells is that they contain membrane-bound organelles, such as the nucleus and mitochondria, that carry out specialized functions. Since biological membranes are only selectively permeable to solutes, they help create a compartment with controlled conditions inside an organelle. These microenvironments are tailored to the organelle's specific functions and help isolate them from the surrounding cytosol.
For example, lysosomes in the animal cells...
Regulation of Nuclear Protein Sorting01:45

Regulation of Nuclear Protein Sorting

Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
Delivery Pathways to the Lysosome01:36

Delivery Pathways to the Lysosome

Eukaryotic cells use different mechanisms to eliminate toxic waste obsolete and worn-out substances. Lysosomes play a pivotal role in this, and hence, these substances are carried to the lysosome from other parts of the cell and extracellular space through different pathways. The most elaborately studied pathways to the lysosome are the endocytic pathways.
Endocytosis
In endocytosis, the cell membrane takes up macromolecules and particles from the surrounding medium. Clathrin-mediated...