Related Experiment Video
Updated: Jun 7, 2026

09:43
Purification of H3 and H4 Histone Proteins and the Quantification of Acetylated Histone Marks in Cells and Brain Tissue
Published on: November 30, 2018
Histone deacetylases in RA: epigenetics and epiphenomena
Arthritis Research & Therapy
|October 21, 2010
Summary
Histone deacetylase (HDAC) activity is elevated in rheumatoid arthritis (RA) synovium, contrary to previous hypotheses. Tumor necrosis factor-alpha (TNFα) stimulation in RA fibroblast-like synoviocytes (FLSs) increases HDAC activity and expression, suggesting inflammation drives these changes.
Area of Science:
- Rheumatology
- Molecular Biology
- Epigenetics
Background:
- Histone deacetylases (HDACs) regulate gene expression epigenetically.
- Reduced synovial HDAC expression was previously hypothesized to promote rheumatoid arthritis (RA) pathogenesis.
- This hypothesis suggested enhanced transcription factor access to inflammatory gene promoters.
Discussion:
- Kawabata et al. found increased HDAC activity and expression in RA synovium and fibroblast-like synoviocytes (FLSs).
- HDAC1 expression and synovial tumor necrosis factor-alpha (TNFα) production were elevated in RA patients.
- TNFα stimulation of RA FLSs specifically increased HDAC activity and HDAC1 expression.
Key Insights:
- Synovial HDAC activity and expression are increased in RA, challenging prior assumptions.
- The observed changes in HDACs appear secondary to the local inflammatory milieu.
- TNFα plays a significant role in modulating HDAC activity in RA FLSs.
Outlook:
- Further investigation into the precise mechanisms linking TNFα and HDACs in RA is warranted.
- Targeting HDACs or their regulatory pathways could offer novel therapeutic strategies for RA.
- Understanding these epigenetic modifications may lead to improved diagnostic or prognostic biomarkers for RA.
Related Concept Videos
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Spreading of Chromatin Modifications
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Writers
The writer is an enzyme that can...
Epigenetic Regulation
Epigenetic changes alter the physical structure of the DNA without changing the genetic sequence and often regulate whether genes are turned on or off. This regulation ensures that each cell produces only proteins necessary for its function. For example, proteins that promote bone growth are not produced in muscle cells. Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
X-chromosome...
X-chromosome...
Epigenetic Regulation
Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
Epigenetic Regulation
Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.

