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Updated: Jun 7, 2026

Demonstration of the Sequence Alignment to Predict Across Species Susceptibility Tool for Rapid Assessment of Protein Conservation
Published on: February 10, 2023
Species extrapolation for the 21st century
Malin C Celander1, Jared V Goldstone, Nancy D Denslow
1University of Gothenburg, Department of Zoology, Göteborg, Sweden. malin.celander@zool.gu.se
Ecological risk assessments can improve species extrapolation by understanding toxicological mechanisms. Research aims for predictive in silico models for wildlife toxicity, crucial for environmental safety factors.
Area of Science:
- Environmental toxicology
- Computational toxicology
- Ecotoxicology
Background:
- Safety factors in ecological risk assessment rely on extrapolating lab species' toxic responses to environmental populations.
- Current extrapolation methods have limitations, necessitating more accurate cross-species predictions.
- Understanding toxicological mechanisms and molecular pathways is key to improving interspecies extrapolation.
Purpose of the Study:
- To present a conceptual approach for cross-species extrapolation in ecological risk assessment.
- To highlight development goals for predictive in silico extrapolation of wildlife species' toxic responses.
- To identify critical information needed for evidence-based species extrapolation.
Main Methods:
- Reviewing advances in mechanistic toxicology and molecular response pathways.
- Presenting a case study on steroidogenesis inhibition in fish (fadrozole, prochloraz).
- Utilizing homology modeling to predict chemical interactions with enzymes like CYP19 aromatase.
Main Results:
- Similar steroidogenesis inhibition effects in fathead minnow, medaka, and zebrafish were linked to shared pharmacokinetic/pharmacodynamic profiles and CYP19A1/2 sequences.
- Homology modeling shows promise for predicting chemical interactions with enzymes across species.
- Substantial research is still needed to develop robust predictive models.
Conclusions:
- Mechanistic understanding and molecular pathway analysis are vital for improving cross-species extrapolation in toxicology.
- In silico approaches, aided by advances in homology modeling, offer future potential for predicting wildlife toxicity.
- Further research into life history, gene expression, and metabolism is required to refine interspecies extrapolation methods.
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