Related Experiment Video
Updated: Jun 7, 2026

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Phosphorylated nucleolin interacts with translationally controlled tumor protein during mitosis and with Oct4 during
Helena Johansson1, Frida Svensson, Rikard Runnberg
1Department of Medical Biochemistry and Cell Biology, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden.
Background:
Reprogramming of somatic cells for derivation of either embryonic stem (ES) cells, by somatic cell nuclear transfer (SCNT), or ES-like cells, by induced pluripotent stem (iPS) cell procedure, provides potential routes toward non-immunogenic cell replacement therapies. Nucleolar proteins serve as markers for activation of embryonic genes, whose expression is crucial for successful reprogramming. Although Nucleolin (Ncl) is one of the most abundant nucleolar proteins, its interaction partners in ES cells have remained unidentified.
Methodology:
Here we explored novel Ncl-interacting proteins using in situ proximity ligation assay (PLA), colocalization and immunoprecipitation (IP) in ES cells.
Principal Findings:
We found that phosphorylated Ncl (Ncl-P) interacted with translationally controlled tumor protein (Tpt1) in murine ES cells. The Ncl-P/Tpt1 complex peaked during mitosis and was reduced upon retinoic acid induced differentiation, signifying a role in cell proliferation. In addition, we showed that Ncl-P interacted with the transcription factor Oct4 during interphase in human as well as murine ES cells, indicating of a role in transcription. The Ncl-P/Oct4 complex peaked during early stages of spontaneous human ES cell differentiation and may thus be involved in the initial differentiation event(s) of mammalian development.
Conclusions:
Here we described two novel protein-protein interactions in ES cells, which give us further insight into the complex network of interacting proteins in pluripotent cells.
Insights
Researchers identified novel interactions of Nucleolin (Ncl) in embryonic stem (ES) cells. Phosphorylated Ncl interacts with Tpt1, potentially regulating cell proliferation, and Oct4, suggesting a role in transcription and early differentiation.
Area of Science:
- Stem cell biology
- Molecular and cellular biology
- Epigenetics
Background:
- Reprogramming somatic cells into embryonic stem (ES) or induced pluripotent stem (iPS) cells offers potential for non-immunogenic therapies.
- Nucleolar proteins are key markers for embryonic gene activation during reprogramming.
- Nucleolin (Ncl), a major nucleolar protein, has unidentified interaction partners in ES cells.
Purpose of the Study:
- To identify novel proteins interacting with Nucleolin (Ncl) in embryonic stem (ES) cells.
- To elucidate the roles of these interactions in ES cell function, proliferation, and differentiation.
Main Methods:
- In situ proximity ligation assay (PLA) to detect protein interactions.
- Colocalization studies to confirm spatial proximity of interacting proteins.
- Immunoprecipitation (IP) to isolate and identify Ncl-binding partners in ES cells.
Main Results:
- Phosphorylated Ncl (Ncl-P) was found to interact with translationally controlled tumor protein (Tpt1) in murine ES cells, with complex levels peaking during mitosis.
- The Ncl-P/Tpt1 interaction decreased upon retinoic acid-induced differentiation, suggesting a role in cell proliferation.
- Ncl-P also interacted with the transcription factor Oct4 in both human and murine ES cells during interphase.
- The Ncl-P/Oct4 complex peaked during early human ES cell differentiation, indicating a potential role in mammalian developmental processes.
Conclusions:
- Two novel protein-protein interactions involving Nucleolin (Ncl) in ES cells were identified: Ncl-P/Tpt1 and Ncl-P/Oct4.
- These findings provide new insights into the molecular mechanisms governing pluripotency and early differentiation.
- The identified interactions highlight potential regulatory roles in cell proliferation, transcription, and developmental events.
Related Concept Videos
The Nucleolus
Abnormal Proliferation
M-Cdk Drives Transition Into Mitosis
Cyclin-dependent kinases, or Cdks, work in concert with cyclins to control cell cycle transitions. M-Cdk, a complex of Cdk1 bound to M cyclin, is a well-known example of this coordinated control that drives the transition from the G2 to the M phase.
M cyclin...
Anaphase Promoting Complex
Disassembly of Intermediate Filaments
Keratin proteins, found at the cell periphery near cell junctions, undergo a cycle of assembly and disassembly. In Type...
Inhibition of Cdk Activity

