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FungiFun: a web-based application for functional categorization of fungal genes and proteins
Steffen Priebe1, Jörg Linde, Daniela Albrecht
1Research Group Systems Biology/Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology-Hans-Knöll-Institute (HKI), Jena, Germany. steffen.priebe@hki-jena.de
Abstract:
FungiFun assigns functional annotations to fungal genes or proteins and performs gene set enrichment analysis. Based on three different classification methods (FunCat, GO and KEGG), FungiFun categorizes genes and proteins for several fungal species on different levels of annotation detail. It is web-based and accessible to users without any programming skills. FungiFun is the first tool offering gene set enrichment analysis including the FunCat categorization. Two biological datasets for Aspergillus fumigatus and Candida albicans were analyzed using FungiFun, providing an overview of the usage and functions of the tool. FungiFun is freely accessible at https://www.omnifung.hki-jena.de/FungiFun/.
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Overview of Advanced Functional Groups
Functional groups are groups of atoms with specific chemical properties that occur within organic molecules and are sometimes denoted as “R”. Functional groups can “functionalize” a compound by enabling it to adopt different physical and chemical properties.
Types of Advanced Functional Groups
The table below summarizes some of the major functional groups in organic chemistry.
Overview of Functional Groups

