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A Purification and In Vitro Activity Assay for a (p)ppGpp Synthetase from Clostridium difficile
Published on: November 3, 2018
Universal phosphatase-coupled glycosyltransferase assay
Zhengliang L Wu1, Cheryl M Ethen, Brittany Prather
1R&D Systems Inc., Minneapolis, MN 55413, USA. leon.wu@rndsystems.com
Glycobiology
|November 18, 2010
Summary
A novel nonradioactive assay quantifies glycosyltransferase activity by detecting released phosphate. This method enables accurate kinetic analysis and high-throughput screening of diverse glycosyltransferases.
Area of Science:
- Biochemistry
- Enzymology
- Assay Development
Background:
- Glycosyltransferases (GTs) are crucial enzymes in synthesizing complex carbohydrates.
- Accurate measurement of GT activity is essential for understanding biological processes and drug discovery.
- Existing assays often involve radioactivity or are not easily adaptable for high-throughput screening.
Purpose of the Study:
- To develop a nonradioactive, colorimetric assay for quantifying glycosyltransferase activity.
- To enable accurate determination of kinetic parameters for various GTs.
- To facilitate high-throughput screening of GT inhibitors and substrates.
Main Methods:
- Utilizing specific phosphatases to release inorganic phosphate from GT reaction leaving groups.
- Employing colorimetric malachite-based reagents for sensitive phosphate detection.
- Adapting the assay for multiwell plates and quantitation using a plate reader.
Main Results:
- Demonstrated a direct proportionality between released phosphate and transferred sugar molecules.
- Successfully applied the assay to a wide range of GTs, including glucosyltransferases, N-acetylglucosaminyltransferases, N-acetylgalactosyltransferases, galactosyltransferases, fucosyltransferases, and sialyltransferases.
- Validated the assay by characterizing Clostridium difficile toxin B, human KTELC1, and human sialyltransferase ST6GAL1.
Conclusions:
- The developed assay provides a robust, nonradioactive, and high-throughput method for measuring glycosyltransferase activity.
- This assay is versatile and applicable to diverse glycosyltransferase families.
- It offers a valuable tool for biochemical research, drug discovery, and glycobiology studies.
