Seeing the portal in herpes simplex virus type 1 B capsids
1Structural Computational Biology and Molecular Biophysics Program, Baylor College of Medicine, Houston, Texas 77030, USA.
Journal of Virology
|November 26, 2010
Summary
Structural virology challenges were overcome using Zernike phase-contrast cryo-electron microscopy to visualize the herpes simplex virus type 1 portal vertex. This study reveals the 12-subunit portal organization, clarifying its location and stoichiometry.
Area of Science:
- Structural biology
- Virology
- Microscopy
Background:
- Large icosahedral viruses present challenges in resolving nonicosahedral components.
- Understanding viral structures is crucial for virology and drug development.
Purpose of the Study:
- To resolve the structure of the unique portal vertex in herpes simplex virus type 1 (HSV-1) capsids.
- To determine the subunit organization, location, and stoichiometry of the HSV-1 portal.
Main Methods:
- Utilized Zernike phase-contrast electron cryomicroscopy for enhanced image contrast.
- Performed image reconstruction to analyze ice-embedded HSV-1 capsids.
Main Results:
- Successfully retrieved the structure of the portal vertex within the icosahedral capsid.
- Unambiguously resolved the 12-subunit portal located beneath a pentameric vertex.
- Provided the first detailed view of portal subunit organization in a eukaryotic virus.
Conclusions:
- Zernike phase-contrast cryo-electron microscopy is effective for visualizing complex viral structures.
- The study clarifies the portal's location and 12-subunit stoichiometry in herpesviruses.
- This work advances structural virology by resolving previously challenging viral components.
Related Concept Videos
Herpes
Herpes simplex type 1 (HSV‑1) is a widespread pathogen responsible for orolabial lesions. It is an enveloped, double-stranded DNA (dsDNA) virus belonging to the family Herpesviridae. Once the virus infects a host cell, its double‑stranded DNA genome is delivered into the nucleus, where a coordinated cascade of immediate‑early, early, and late gene expression directs viral DNA replication, structural protein synthesis, and virion assembly. After primary infection of epithelial cells, HSV-1...
Genital Herpes
Genital herpes is a sexually transmitted infection primarily caused by herpes simplex virus type 2 (HSV-2), though herpes simplex virus type 1 (HSV-1) is increasingly implicated in genital infections, particularly among younger populations. Transmission occurs mainly through sexual contact, with asymptomatic viral shedding serving as a major route of spread. This characteristic makes HSV-2 difficult to control at a population level, as individuals may unknowingly transmit the virus even in the...
Pinching-off of Coated Vesicles
Vesicle budding is orchestrated by distinct cytosolic proteins such as adaptor proteins, coat proteins, and GTPases. To initiate vesicle budding, membrane-bending proteins containing crescent-shaped BAR domains bind to the lipid heads in the bilayer and distort the membrane to form a protein-coated vesicle bud. Adaptors proteins such as AP2 for clathrin-coated vesicles can nucleate on the deformed membrane. Finally, coat proteins such as clathrin or COPI and COPII assemble into a coat forming...
Viral Structure
Viruses are extraordinarily diverse in shape and size, but they all have several structural features in common. All viruses have a core that contains a DNA- or RNA-based genome. The core is surrounded by a protective coat of proteins called the capsid. The capsid is composed of subunits called capsomeres. The capsid and genome-containing core are together known as the nucleocapsid.
Introduction to Virus
Viruses are unique biological entities that blur the boundary between living and non-living systems. Although they lack cellular structure and metabolic processes, they can exhibit characteristics of life when infecting a host. Their defining feature is a nucleic acid core, composed of either DNA or RNA, encapsulated within a protein coat called a capsid. This simple structure allows them to invade host cells and use their machinery for replication efficiently.Viral Structure and...


