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Evidence of a recombinant wild-type human astrovirus strain from a Kenyan child with gastroenteritis
Marianne Wolfaardt1, Nicholas M Kiulia, Jason M Mwenda
1Department of Medical Virology, Faculty of Health Sciences, University of Pretoria/National Health Laboratory Service, P.O. Box 2034, Pretoria 0001, South Africa.
Abstract:
A human astrovirus (HAstV) strain from Kenya was characterized by nucleotide sequence analysis. Sequences from open reading frame 1a (ORF1a) clustered with genotype 6/7, those from ORF1b clustered with genotype 3, and those from ORF2 clustered with genotype 2. A recombination point in the ORF1b-ORF2 junction was identified, with a second possible recombination point within the ORF1a region.
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