DNA damage induced by alkylating agents and repair pathways

Natsuko Kondo1, Akihisa Takahashi, Koji Ono

  • 1Particle Radiation Oncology Research Center, Research Reactor Institute, Kyoto University, Kumatori-cho, Sennan-gun, Osaka 590-0494, Japan.

Journal of Nucleic Acids
|November 30, 2010
PubMed

Insights

Cells possess intricate DNA repair mechanisms to counteract cytotoxic effects from alkylating agents. Understanding these repair pathways, including base excision repair and nucleotide excision repair, is crucial for clinical applications.

Area of Science:

  • Molecular Biology
  • Genetics
  • Biochemistry

Background:

  • Cellular DNA repair processes significantly mitigate the cytotoxic impact of alkylating agents.
  • Alkylating agents induce DNA damage through various adducts and cross-links.
  • Understanding DNA repair is essential for managing alkylating agent toxicity.

Purpose of the Study:

  • To elucidate the diverse DNA repair pathways that counteract alkylating agent-induced DNA damage.
  • To differentiate repair mechanisms for simple methylating agents versus bifunctional agents.
  • To highlight the clinical relevance of comprehending cellular responses to DNA damage.

Main Methods:

  • Review of established DNA repair pathways including base excision repair (BER), nucleotide excision repair (NER), O(6)-methylguanine-DNA methyltransferase (MGMT), and mismatch repair (MMR).
  • Analysis of repair mechanisms for interstrand cross-links (ICLs) involving NER factors, Fanconi anemia pathway, and homologous recombination.
  • Integration of knowledge on adduct formation and repair outcomes.

Main Results:

  • N-methylations are repaired by BER, AlkB homologues, or NER.
  • O(6)-methylguanine (MeG) is repaired by MGMT; O(6)MeG:T mispairs are recognized but not repaired by MMR, leading to double-strand breaks.
  • Interstrand cross-links (ICLs) are repaired by a complex interplay of NER, Fanconi anemia pathway, and homologous recombination.

Conclusions:

  • Cellular DNA repair mechanisms are critical for attenuating alkylating agent cytotoxicity.
  • Distinct repair pathways handle different types of alkylating damage, from simple N-methylations to complex ICLs.
  • A comprehensive understanding of these repair pathways holds significant potential for clinical medicine, particularly in cancer therapy and managing drug toxicity.

Related Concept Videos

Nucleotide Excision Repair01:38

Nucleotide Excision Repair

DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview
Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview
Overview of DNA Repair02:25

Overview of DNA Repair

In order to be passed through generations, genomic DNA must be undamaged and error-free. However, every day, DNA in a cell undergoes several thousand to a million damaging events by natural causes and external factors. Ionizing radiation such as UV rays, free radicals produced during cellular respiration, and hydrolytic damage from metabolic reactions can alter the structure of DNA. Damages caused include single-base alteration, base dimerization, chain breaks, and cross-linkage.
Chemically...
Overview of DNA Repair02:25

Overview of DNA Repair

In order to be passed through generations, genomic DNA must be undamaged and error-free. However, every day, DNA in a cell undergoes several thousand to a million damaging events by natural causes and external factors. Ionizing radiation such as UV rays, free radicals produced during cellular respiration, and hydrolytic damage from metabolic reactions can alter the structure of DNA. Damages caused include single-base alteration, base dimerization, chain breaks, and cross-linkage.
Chemically...
Base Excision Repair01:54

Base Excision Repair

One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...