Conserved genes act as modifiers of invertebrate SMN loss of function defects

Maria Dimitriadi1, James N Sleigh, Amy Walker

  • 1Department of Neuroscience, Brown University, Providence, Rhode Island, USA.

Plos Genetics
|December 3, 2010
PubMed

Insights

Researchers identified conserved genes that modify Spinal Muscular Atrophy (SMA) defects in invertebrate models. These findings highlight endocytosis and mRNA regulation as key pathways in SMA pathology.

Area of Science:

  • Genetics
  • Molecular Biology
  • Neuroscience

Background:

  • Spinal Muscular Atrophy (SMA) is a genetic disorder caused by reduced function of the Survival of Motor Neuron (SMN) protein.
  • The precise molecular mechanisms underlying SMA pathology are not fully understood.
  • Invertebrate models offer powerful tools for identifying conserved genetic modifiers.

Purpose of the Study:

  • To identify conserved genes that modify defects caused by reduced Survival of Motor Neuron (SMN) protein function.
  • To investigate the cross-species conservation of these genetic modifiers.
  • To elucidate critical cellular pathways involved in SMA pathogenesis.

Main Methods:

  • Genome-wide RNA interference (RNAi) screen in *C. elegans* to identify SMN modifier genes.
  • Cross-species validation of modifier gene function between *Drosophila melanogaster* and *C. elegans*.
  • Bioinformatic analysis to identify conserved pathways among modifier genes.

Main Results:

  • A genome-wide RNAi screen in *C. elegans* identified four SMN modifier genes.
  • Cross-species analysis revealed that orthologs of genes identified in one model modified SMN loss-of-function defects in the other.
  • Twelve *C. elegans* orthologs of previously identified *Drosophila* genes modified *C. elegans* SMN defects.
  • Two *Drosophila* orthologs of *C. elegans*-identified genes modified *Drosophila* SMN defects.

Conclusions:

  • Conserved cellular pathways, including endocytosis and mRNA regulation, are critical genetic modifiers of SMN loss-of-function defects.
  • These findings provide insights into the molecular basis of Spinal Muscular Atrophy.
  • Invertebrate genetic screens are effective for identifying conserved pathways relevant to human diseases.

Related Concept Videos

Pleiotropy01:33

Pleiotropy

Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...
In-vitro Mutagenesis01:16

In-vitro Mutagenesis

To learn more about the function of a gene, researchers can observe what happens when the gene is inactivated or “knocked out,” by creating genetically engineered knockout animals. Knockout mice have been particularly useful as models for human diseases such as cancer, Parkinson’s disease, and diabetes.
Dosage Compensation02:50

Dosage Compensation

In animals, gender is determined by the number and type of sex chromosome. For example, human females have two X chromosomes, and males have one X and one Y chromosome, whereas C.elegans with one X chromosome is a male, and the one with two X chromosomes is a hermaphrodite.
In addition to sexual development, the X chromosome has genes involved in autosomal functions such as brain development and the immune system. Therefore, males and females with  distinct numbers of X chromosomes will have...
Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved DNA...
Loss of Tumor Suppressor Gene Functions01:12

Loss of Tumor Suppressor Gene Functions

Tumor suppressor genes are normal genes that can slow down cell division, repair DNA mistakes, or program the cells for apoptosis in case of irreparable damage. Hence, they play an essential role in preventing the proliferation of damaged cells.
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...
Loss of Tumor Suppressor Gene Functions01:12

Loss of Tumor Suppressor Gene Functions

Tumor suppressor genes are normal genes that can slow down cell division, repair DNA mistakes, or program the cells for apoptosis in case of irreparable damage. Hence, they play an essential role in preventing the proliferation of damaged cells.
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...