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Updated: Jun 6, 2026

Identification of MyoD Interactome Using Tandem Affinity Purification Coupled to Mass Spectrometry
Published on: May 17, 2016
Yox1 links MBF-dependent transcription to completion of DNA synthesis
Blanca Gómez-Escoda1, Tsvetomira Ivanova, Isabel A Calvo
1Oxidative Stress and Cell Cycle Group, Universitat Pompeu Fabra, C/Doctor Aiguader 88, Barcelona 08003, Spain.
Abstract:
When DNA replication is challenged cells activate a DNA synthesis checkpoint, blocking cell cycle progression until they are able to overcome the replication defects. In fission yeast, Cds1 is the effector kinase of this checkpoint, inhibiting M-phase entry, stabilizing stalled replication forks and triggering transcriptional activation of S-phase genes. The molecular basis of this last effect is largely unknown. The Mlu1 binding factor (MBF) complex controls the transcription of S-phase genes. We purified novel interactors of the MBF complex and identified the repressor Yox1. When the DNA synthesis checkpoint is activated, Yox1 is phosphorylated, which abrogates its binding to MBF. MBF-dependent transcription therefore remains active until cells are able to overcome this challenge.
Insights
Cells activate a DNA synthesis checkpoint to fix replication errors. This study reveals how the repressor Yox1 is inactivated, allowing S-phase gene transcription during this critical process.
Area of Science:
- Cell biology
- Molecular biology
- Genetics
Background:
- Cells activate a DNA synthesis checkpoint when replication is challenged, halting cell cycle progression.
- In fission yeast, Cds1 kinase manages this checkpoint, inhibiting M-phase entry and stabilizing replication forks.
- The mechanism by which Cds1 triggers S-phase gene transcription remains largely unknown.
Purpose of the Study:
- To elucidate the molecular mechanisms underlying the transcriptional activation of S-phase genes during the DNA synthesis checkpoint.
- To identify novel interactors of the Mlu1 binding factor (MBF) complex, a key regulator of S-phase gene transcription.
Main Methods:
- Purification of novel interactors of the MBF complex.
- Identification of the repressor Yox1 as an MBF interactor.
- Phosphorylation analysis of Yox1 during checkpoint activation.
Main Results:
- Yox1 was identified as a repressor that interacts with the MBF complex.
- Upon DNA synthesis checkpoint activation, Yox1 undergoes phosphorylation.
- Phosphorylation of Yox1 abrogates its binding to the MBF complex.
Conclusions:
- The inactivation of the repressor Yox1 through phosphorylation is a key mechanism for activating S-phase gene transcription during the DNA synthesis checkpoint.
- This process ensures that essential S-phase genes remain transcribed until replication defects are resolved.
- The findings provide new insights into cell cycle regulation and DNA damage response pathways.
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