On p21 tracking property in cancer cell unravelled bio-digitally in silico. Are apoptosis principles universal?

R M Ardito Marretta1, G Barbaraci

  • 1Department of Structural, Aerospace Engineering and Geotechnics, University of Palermo, Viale delle Scienze, Block 8, 90128, Palermo, Italy. romario@unipa.it

Insights

p21 protein normally halts cell division and triggers apoptosis. In cancer, its irregular mRNA dynamics disrupt this, aiding proliferation, but new mechanisms can restore apoptosis.

Area of Science:

  • Molecular Biology
  • Cancer Research
  • Cell Signaling

Background:

  • Severe DNA damage activates p21, inhibiting cell cycle (G2/M transition) and promoting apoptosis via retinoblastoma protein, E2F1, and APAF1.
  • Mechanisms underlying apoptosis failure in proliferating cancer cells remain unclear.
  • The p21/p53/Mdm2 network typically exhibits a digital response in cancer cells.

Purpose of the Study:

  • To investigate the role of p21 mRNA dynamics in apoptosis failure during cancer cell proliferation.
  • To elucidate the mechanisms by which cancer cells evade apoptosis.
  • To identify strategies for re-establishing a stable apoptotic phase in cancer cells.

Main Methods:

  • Development of an original cell signaling-protein simulator.
  • In silico simulation of protein interactions and signaling pathways.
  • Analysis of p21 mRNA dynamics and its correlation with apoptosis.

Main Results:

  • Apoptosis phase instability in cancer cells is directly linked to irregular p21 mRNA dynamics, operating under a 'tracking memory' principle.
  • p21 mRNA paradoxically decouples from its target genes, facilitating cancer cell proliferation.
  • Mechanisms enabling cancer cells to re-enter a stable apoptosis phase were identified.

Conclusions:

  • Aberrant p21 mRNA dynamics are a key factor in cancer cell apoptosis evasion and proliferation.
  • The 'tracking memory' principle in p21 mRNA regulation contributes to cancer progression.
  • Targeting these identified mechanisms offers potential therapeutic strategies to restore apoptosis in cancer.

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