On p21 tracking property in cancer cell unravelled bio-digitally in silico. Are apoptosis principles universal?
Related Experiment Video
Updated: Jun 6, 2026

Strategies for Tracking Anastasis, A Cell Survival Phenomenon that Reverses Apoptosis
Published on: February 16, 2015
R M Ardito Marretta1, G Barbaraci
1Department of Structural, Aerospace Engineering and Geotechnics, University of Palermo, Viale delle Scienze, Block 8, 90128, Palermo, Italy. romario@unipa.it
Abstract:
Upon severe DNA damage, p21 acts in a dual mode; on the one hand, it inhibits the cyclin-CDK complex for arresting the G2/M transition and on the other hand, it indirectly becomes an apoptotic factor by activating--in sequence--the retinoblastoma protein, E2F1 and APAF1 expressions. But, in a cancer cells proliferation, the mechanisms of, and participants in, the apoptosis failure remain unclear. Since the p21/p53/Mdm2 proteins network normally involves a digital response in a cancer cell, through an original design of a cell signalling-protein simulator, we demonstrate, in silico, that apoptosis phase instability is fully reciprocated by p21 mRNA irregular dynamics which operates according to a "tracking memory" principle. We show p21mRNA paradoxically ceases to act in concert with specific target genes and becomes an underlying accomplice of cancer proliferation. Here, we also identify the mechanisms for allowing the cancer cell to re-enter inside a steady stable apoptosis phase.
Insights
p21 protein normally halts cell division and triggers apoptosis. In cancer, its irregular mRNA dynamics disrupt this, aiding proliferation, but new mechanisms can restore apoptosis.
Area of Science:
- Molecular Biology
- Cancer Research
- Cell Signaling
Background:
- Severe DNA damage activates p21, inhibiting cell cycle (G2/M transition) and promoting apoptosis via retinoblastoma protein, E2F1, and APAF1.
- Mechanisms underlying apoptosis failure in proliferating cancer cells remain unclear.
- The p21/p53/Mdm2 network typically exhibits a digital response in cancer cells.
Purpose of the Study:
- To investigate the role of p21 mRNA dynamics in apoptosis failure during cancer cell proliferation.
- To elucidate the mechanisms by which cancer cells evade apoptosis.
- To identify strategies for re-establishing a stable apoptotic phase in cancer cells.
Main Methods:
- Development of an original cell signaling-protein simulator.
- In silico simulation of protein interactions and signaling pathways.
- Analysis of p21 mRNA dynamics and its correlation with apoptosis.
Main Results:
- Apoptosis phase instability in cancer cells is directly linked to irregular p21 mRNA dynamics, operating under a 'tracking memory' principle.
- p21 mRNA paradoxically decouples from its target genes, facilitating cancer cell proliferation.
- Mechanisms enabling cancer cells to re-enter a stable apoptosis phase were identified.
Conclusions:
- Aberrant p21 mRNA dynamics are a key factor in cancer cell apoptosis evasion and proliferation.
- The 'tracking memory' principle in p21 mRNA regulation contributes to cancer progression.
- Targeting these identified mechanisms offers potential therapeutic strategies to restore apoptosis in cancer.
Related Concept Videos
The Intrinsic Apoptotic Pathway
Apoptosis
DNA Damage Can Stall the Cell Cycle
DNA Damage can Stall the Cell Cycle
Cellular Injury V: Apoptosis and Autophagy
Negative Regulator Molecules

