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Collection and Extraction of Occupational Air Samples for Analysis of Fungal DNA
Published on: May 2, 2018
Genotypic variation in Penicillium chysogenum from indoor environments
James Scott1, Wendy A Untereiner, Bess Wong
1Department of Public Health Sciences, University of Toronto, Toronto, Ontario, M5T 1R4; and Sporometrics Inc., 219 Dufferin St., Suite G20C, Toronto, Ontario, M6K 1Y9.
Mycologia
|December 15, 2010
Summary
Penicillium chrysogenum, a common indoor mold, exhibits a strictly clonal population structure. Most house isolates belong to a dominant lineage, distinct from outdoor air populations.
Area of Science:
- Mycology
- Population Genetics
- Environmental Microbiology
Background:
- Penicillium chrysogenum is a ubiquitous mold frequently found indoors.
- Understanding its population structure is crucial for managing indoor environments.
Purpose of the Study:
- To investigate the population genetics and phylogenetic relationships of Penicillium chrysogenum isolates from indoor environments.
- To determine the genetic diversity and clonal structure of P. chrysogenum in Wallaceburg, Ontario.
Main Methods:
- Multilocus genotyping using heteroduplex mobility assay on acetyl co-enzyme A synthase, beta-tubulin, thioredoxin reductase, and ITS regions.
- Phylogenetic analysis employing maximum parsimony on allele sequences.
Main Results:
- Five unique multilocus haplotypes were identified, indicating a strictly clonal population structure with no evidence of recombination.
- Phylogenetic analysis resolved three distinct lineages, with one dominant clade comprising over 90% of house isolates.
- A second clade included house isolates clustered with ex-type strains of P. chrysogenum and P. notatum.
- Penicillium chrysogenum was rarely detected in outdoor air samples.
Conclusions:
- The indoor population of Penicillium chrysogenum is genetically uniform and clonal, dominated by a single lineage.
- This suggests limited gene flow and potential specific adaptations to indoor environments.
- The rarity in outdoor air contrasts with its indoor prevalence, highlighting indoor sources or specific dispersal mechanisms.
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