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Updated: Jun 6, 2026

06:38
Pattern-based Search of Epigenomic Data Using GeNemo
Published on: October 8, 2017
Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case
Terry Camerlengo1, Hatice Gulcin Ozer, Pearlly Yan
1The Ohio State University Columbus, Ohio, USA.
Abstract:
Enabling data analysis in large data depositories for high throughput experimental data such as gene microarrays and ChIP-seq is challenging. In this paper, we discuss three methods for integrating QUEST, a data depository for epigenetic experiments, with a web-based data analysis platform GenePattern. These methods are universal and can serve as an exemplary implementation resolving the dilemma facing many similar database systems in integrating data analysis tools.

