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Published on: August 21, 2016
Induction of the SOS response in Escherichia coli by azidothymidine and dideoxynucleosides
S W Mamber1, K W Brookshire, S Forenza
1Pharmaceutical Research Institute, Bristol-Myers Squibb Company, Wallingford, Connecticut 06492-7440.
Abstract:
A number of nucleosides with anti-human immunodeficiency virus (HIV) activity were evaluated in two colorimetric (beta-galactosidase) assays for induction of the SOS response in Escherichia coli. 3'-Azido-3'-deoxythymidine (azidothymidine; AZT), 2',3'-dideoxyadenosine (ddA), 2',3'-dideoxyguanosine (ddG), and 2',3'-dideoxyinosine (ddI) induced cell filamentation (sulA) and prophage lambda in well-agar diffusion and liquid microsuspension assays. AZT was approximately 100 times more potent than the dideoxypurine nucleosides, inducing sulA at less than 100 ng/ml. 2',3'-Dideoxythymidine (ddT) and 2',3'-dideoxy-2',3'-didehydrothymidine (D4T) induced sulA at 100 to 1,000 micrograms/ml, while 2',3'-dideoxycytidine (ddC) weakly induced prophage lambda. Activity relationships thus were AZT greater than ddA greater than or equal to ddI greater than or equal to ddG greater than ddT = D4T greater than ddC. ddA and ddI had equivalent activities in agar diffusion assays, but different activity profiles were observed in liquid microsuspension assays. The differences may be related to drug metabolism. AZT and ddA showed marginal effects in a DNA repair (preferential toxicity) assay in which E. coli WP2 and CM871 uvrA recA lexA were used. Furthermore, none of the agents was able to preferentially inhibit Bacillus subtilis M45 recA relative to wild-type strain H17. These data suggest that AZT and the dideoxynucleosides do not cause DNA lesions that are repairable by excision repair and/or error-free postreplication repair processes. Rather, the SOS response appears to be induced by DNA chain termination leading to the inhibition of DNA replication. Bacterial assays for induction of the SOS response may be useful as simple, rapid prescreens for the discovery of new anti-HIV agents. Moreover, such assays may provide an additional parameter in the evaluation of agents with demonstrated activity against HIV and other retroviruses.
Insights
The SOS response in E. coli can be induced by anti-HIV nucleosides like azidothymidine (AZT) and dideoxynucleosides, suggesting bacterial assays are useful for discovering new HIV treatments.
Area of Science:
- Microbiology
- Virology
- Drug Discovery
Background:
- Human immunodeficiency virus (HIV) remains a significant global health challenge.
- Nucleoside analogs are a cornerstone of antiretroviral therapy.
- Understanding the mechanisms of action and potential toxicities of these agents is crucial.
Purpose of the Study:
- To evaluate the ability of various anti-HIV nucleosides to induce the SOS response in Escherichia coli.
- To assess the utility of bacterial SOS response assays as a prescreen for novel anti-HIV agents.
- To investigate the relationship between chemical structure and SOS-inducing activity.
Main Methods:
- Colorimetric (beta-galactosidase) assays were employed to measure SOS induction in E. coli.
- Two assay formats were used: agar diffusion and liquid microsuspension.
- Specific nucleosides tested included azidothymidine (AZT), 2',3'-dideoxyadenosine (ddA), 2',3'-dideoxyguanosine (ddG), 2',3'-dideoxyinosine (ddI), 2',3'-dideoxythymidine (ddT), 2',3'-dideoxy-2',3'-didehydrothymidine (D4T), and 2',3'-dideoxycytidine (ddC).
Main Results:
- Azidothymidine (AZT) was the most potent inducer of the SOS response, approximately 100 times more active than dideoxypurine nucleosides.
- Dideoxypurine nucleosides (ddA, ddG, ddI) induced the SOS response, with varying potencies.
- ddT and D4T showed moderate SOS-inducing activity, while ddC had weak activity.
- AZT and ddA demonstrated marginal effects in DNA repair assays, suggesting their primary mechanism is not DNA lesion induction.
- Observed differences in activity between agar diffusion and liquid microsuspension assays for ddA and ddI may relate to drug metabolism.
Conclusions:
- The SOS response in E. coli is induced by anti-HIV nucleosides, likely through DNA chain termination and inhibition of DNA replication, rather than DNA damage.
- Bacterial SOS response assays serve as effective, rapid prescreens for identifying new anti-HIV drug candidates.
- These assays can provide valuable supplementary data for evaluating antiretroviral agents.
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