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Updated: Jun 5, 2026

Analysis of Termination of Transcription Using BrUTP-strand-specific Transcription Run-on (TRO) Approach
Published on: March 12, 2017
Transcription termination maintains chromosome integrity
Robert S Washburn1, Max E Gottesman
1Department of Microbiology and Immunology, Columbia University Medical Center, New York, NY 10032, USA.
Transcription termination factors prevent DNA replication fork arrest. Inhibiting Rho-dependent termination caused double-strand breaks, highlighting its role in maintaining genome stability during DNA replication.
Area of Science:
- Molecular Biology
- Genetics
- Microbiology
Background:
- DNA replication fork progression can be hindered by collisions with transcription elongation complexes (TECs).
- Transcription termination is crucial for preventing TECs from obstructing DNA replication, which can lead to replication fork arrest and DNA double-strand breaks.
Purpose of the Study:
- To investigate the role of Rho-dependent transcription termination in preventing DNA double-strand breaks.
- To elucidate the mechanism by which transcription termination factors safeguard DNA replication.
Main Methods:
- Inhibition of Rho-dependent transcription termination using bicyclomycin in Escherichia coli.
- Analysis of double-strand break formation in wild-type and mutant strains (nusA, nusG, rpoB*35, recB, ruvC, rep, priA).
- Assessment of DNA replication dependency and replication fork collapse.
Main Results:
- Bicyclomycin treatment induced DNA double-strand breaks, dependent on DNA replication.
- Mutations in Rho co-factors (nusA, nusG) led to hypersensitivity to bicyclomycin and chromosome fragmentation.
- An RNA polymerase mutation (rpoB*35) conferring TEC destabilization significantly increased resistance to bicyclomycin.
Conclusions:
- Rho-dependent transcription termination is essential for preventing replication fork arrest and DNA double-strand breaks.
- The findings support a model where Rho releases obstructing TECs in response to a translocating replisome, ensuring genome integrity.
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