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Updated: Jun 5, 2026

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics
Published on: January 5, 2024
Prophage spontaneous activation promotes DNA release enhancing biofilm formation in Streptococcus pneumoniae
Margarida Carrolo1, Maria João Frias, Francisco Rodrigues Pinto
1Instituto de Microbiologia, Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal.
Abstract:
Streptococcus pneumoniae (pneumococcus) is able to form biofilms in vivo and previous studies propose that pneumococcal biofilms play a relevant role both in colonization and infection. Additionally, pneumococci recovered from human infections are characterized by a high prevalence of lysogenic bacteriophages (phages) residing quiescently in their host chromosome. We investigated a possible link between lysogeny and biofilm formation. Considering that extracellular DNA (eDNA) is a key factor in the biofilm matrix, we reasoned that prophage spontaneous activation with the consequent bacterial host lysis could provide a source of eDNA, enhancing pneumococcal biofilm development. Monitoring biofilm growth of lysogenic and non-lysogenic pneumococcal strains indicated that phage-infected bacteria are more proficient at forming biofilms, that is their biofilms are characterized by a higher biomass and cell viability. The presence of phage particles throughout the lysogenic strains biofilm development implicated prophage spontaneous induction in this effect. Analysis of lysogens deficient for phage lysin and the bacterial major autolysin revealed that the absence of either lytic activity impaired biofilm development and the addition of DNA restored the ability of mutant strains to form robust biofilms. These findings establish that limited phage-mediated host lysis of a fraction of the bacterial population, due to spontaneous phage induction, constitutes an important source of eDNA for the S. pneumoniae biofilm matrix and that this localized release of eDNA favors biofilm formation by the remaining bacterial population.
Insights
Lysogenic bacteriophages (phages) enhance Streptococcus pneumoniae biofilm formation by releasing extracellular DNA (eDNA) through spontaneous host cell lysis. This eDNA supports robust biofilm development, crucial for pneumococcal colonization and infection.
Area of Science:
- Microbiology
- Bacteriology
- Molecular Biology
Background:
- Streptococcus pneumoniae forms biofilms in vivo, contributing to colonization and infection.
- Lysogenic bacteriophages (phages) are prevalent in human-infecting pneumococci.
- Extracellular DNA (eDNA) is a critical component of bacterial biofilms.
Purpose of the Study:
- To investigate the link between lysogeny and Streptococcus pneumoniae biofilm formation.
- To determine if phage-mediated lysis contributes to eDNA release and biofilm development.
Main Methods:
- Comparison of biofilm formation in lysogenic and non-lysogenic pneumococcal strains.
- Analysis of lysogens deficient in phage lysin or bacterial autolysin.
- Assessment of biofilm biomass, cell viability, and the effect of exogenous DNA addition.
Main Results:
- Lysogenic pneumococcal strains exhibit enhanced biofilm formation (higher biomass and cell viability).
- Spontaneous prophage induction and subsequent host lysis provide eDNA for the biofilm matrix.
- Impaired biofilm development in strains lacking lytic activity was restored by DNA addition.
Conclusions:
- Spontaneous phage induction and limited host lysis are significant sources of eDNA for S. pneumoniae biofilms.
- Phage-mediated eDNA release promotes biofilm development in the remaining bacterial population.
- This mechanism highlights a novel role for lysogeny in pneumococcal pathogenesis.
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