DNA repair defects sensitize cells to anticodon nuclease yeast killer toxins
Roland Klassen1, Sabrina Wemhoff, Jens Krause
1Institut für Molekulare Mikrobiologie und Biotechnologie, Westfälische Wilhelms-Universität Münster, 48149 Münster, Germany.
Abstract:
Killer toxins from Kluyveromyces lactis (zymocin) and Pichia acaciae (PaT) were found to disable translation in target cells by virtue of anticodon nuclease (ACNase) activities on tRNA(Glu) and tRNA(Gln), respectively. Surprisingly, however, ACNase exposure does not only impair translation, but also affects genome integrity and concomitantly DNA damage occurs. Previously, it was shown that homologous recombination protects cells from ACNase toxicity. Here, we have analyzed whether other DNA repair pathways are functional in conferring ACNase resistance as well. In addition to HR, base excision repair (BER) and postreplication repair (PRR) promote clear resistance to either, PaT and zymocin. Comparative toxin sensitivity analysis of BER mutants revealed that its ACNase protective function is due to the endonucleases acting on apurinic (AP) sites, whereas none of the known DNA glycosylases is involved. Because PaT and zymocin require the presence of the ELP3/TRM9-dependent wobble uridine modification 5-methoxy-carbonyl-methyl (mcm(5)) for tRNA cleavage, we analyzed toxin response in DNA repair mutants additionally lacking such tRNA modifications. ACNase resistance caused by elp3 or trm9 mutations was found to rescue hypersensitivity of DNA repair defects, consistent with DNA damage to occur as a consequence of tRNA cleavage. The obtained genetic evidence promises to reveal new aspects into the mechanism linking translational fidelity and genome surveillance.
Insights
Killer toxins disable translation and damage DNA. DNA repair pathways like homologous recombination, base excision repair, and postreplication repair provide resistance to these toxins. Specific tRNA modifications are crucial for toxin activity.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Killer toxins zymocin and PaT inhibit protein synthesis by cleaving specific tRNAs.
- Anticodon nuclease (ACNase) activity of these toxins also induces DNA damage.
- Homologous recombination (HR) was previously identified as a protective DNA repair pathway.
Purpose of the Study:
- To investigate the role of other DNA repair pathways in conferring resistance to ACNase toxins.
- To elucidate the mechanism by which tRNA cleavage leads to DNA damage and the involvement of tRNA modifications.
Main Methods:
- Comparative toxin sensitivity analysis of various DNA repair mutants (HR, BER, PRR).
- Assessment of DNA repair pathway involvement in resistance to zymocin and PaT.
- Analysis of toxin response in mutants lacking specific tRNA modifications (ELP3/TRM9-dependent wobble uridine modification).
Main Results:
- Base excision repair (BER) and postreplication repair (PRR) were found to confer resistance to PaT and zymocin, in addition to HR.
- BER's protective function against ACNase is mediated by endonucleases acting on apurinic (AP) sites, not DNA glycosylases.
- Mutations in ELP3 or TRM9, affecting tRNA modification, rescued hypersensitivity in DNA repair mutants, indicating DNA damage results from tRNA cleavage.
Conclusions:
- Multiple DNA repair pathways, including BER and PRR, contribute to cellular resistance against anticodon nuclease toxins.
- The study highlights a link between translational fidelity, tRNA modification, and genome surveillance mechanisms.
- Genetic evidence suggests DNA damage is a direct consequence of toxin-induced tRNA cleavage.
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