Related Experiment Video
Updated: Jun 5, 2026

Synthesis of pH Dependent Pyrazole, Imidazole, and Isoindolone Dipyrrinone Fluorophores using a Claisen-Schmidt Condensation Approach
Published on: June 10, 2021
2-(4-Chloro-anilino)pyridine.
M Zainal Abidin Fairuz1, Zaharah Aiyub, Zanariah Abdullah
1Department of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia.
This study reveals the crystal structure of a chlorinated compound, C(11)H(9)ClN(2). Four molecules in the crystal structure form hydrogen bonds, showcasing specific molecular arrangements.
Area of Science:
- Crystallography
- Organic Chemistry
- Molecular Structure
Background:
- The study focuses on the molecular arrangement and bonding within the crystal structure of a specific organic compound.
- Understanding the precise three-dimensional arrangement of atoms in molecules is crucial in chemistry and materials science.
Purpose of the Study:
- To determine and describe the crystal structure of the title compound, C(11)H(9)ClN(2).
- To analyze the intermolecular interactions, specifically hydrogen bonding, between molecules in the solid state.
- To characterize the crystallographic features, including twinning.
Main Methods:
- Single-crystal X-ray diffraction was employed to collect diffraction data.
- The crystal structure was solved and refined using crystallographic software.
- Analysis of the molecular geometry and intermolecular contacts was performed.
Main Results:
- The asymmetric unit contains four independent molecules of C(11)H(9)ClN(2).
- The aromatic rings within each molecule are nearly coplanar.
- Two pairs of amino-pyridyl N-H⋯N hydrogen bonds were identified, linking the molecules.
- A 15% twin component related by a twofold rotation about the [100] axis was observed.
Conclusions:
- The crystal structure of C(11)H(9)ClN(2) has been elucidated, revealing specific molecular conformations.
- Intermolecular hydrogen bonding plays a significant role in organizing the molecules in the crystal lattice.
- The presence of a twin component is an important crystallographic characteristic of this compound.
Related Concept Videos
Nomenclature of Aryl and Heterocyclic Amines
Basicity of Heterocyclic Aromatic Amines
Preparation of Acid Anhydrides
The carboxylate ion acts as a nucleophile that attacks the carbonyl carbon of the acid chloride to form a tetrahedral intermediate. Subsequently, the re-formation of the carbonyl group with the loss of the chloride ion as a leaving group leads to the formation of an acid...
ortho–para-Directing Activators: –CH3, –OH, –⁠NH2, –OCH3
Diazonium Group Substitution: –OH and –H
Aryldiazonium Salts to Azo Dyes: Diazo Coupling

