Related Experiment Video
Updated: Jun 5, 2026

09:55
From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins
Published on: July 4, 2016
Structure and function of BamE within the outer membrane and the β-barrel assembly machine
Timothy J Knowles1, Douglas F Browning, Mark Jeeves
1School of Cancer Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK.
EMBO Reports
|January 8, 2011
Summary
The bacterial outer membrane protein assembly machine (Bam) component, BamE, is monomeric in the periplasm but dimerizes in the cytoplasm. This study reveals BamE
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- Gram-negative bacteria outer membrane protein insertion relies on the essential β-barrel assembly machine (Bam).
- BamE is a core component of the Bam complex, crucial for its function.
Purpose of the Study:
- To elucidate the native structure and mechanism of BamE.
- To understand BamE's conformational changes and interactions within the Bam complex.
Main Methods:
- Native structural analysis of BamE.
- Mutagenesis studies to map binding determinants.
- Interaction studies to define functional roles.
Main Results:
- BamE exists as a monomer in the periplasm and adopts a dimeric form in the cytoplasm.
- BamE specifically binds to phosphatidylglycerol.
- Key determinants for Bam complex binding, outer membrane integrity, and cell viability were identified.
Conclusions:
- BamE undergoes conformational changes influencing its function in protein insertion.
- Phosphatidylglycerol binding and dimerization are critical for BamE's role in the Bam complex.
- This work clarifies BamE's mechanism and its contribution to outer membrane homeostasis.
Related Concept Videos
Porin Insertion in the Outer Mitochondrial Membrane
Porins are beta-barrel proteins translocated to the mitochondrial outer membrane through the TOM complex into the intermembrane space. Porin precursors bind TIM chaperones within the intermembrane space and are guided to the Sorting and Assembly Machinery complex or SAM complex on the outer mitochondrial membrane.
Three models describe the assembly of porins by the SAM complex and their insertion into the outer membrane. Model 1 suggests that porins are assembled outside the SAM channel as the...
Three models describe the assembly of porins by the SAM complex and their insertion into the outer membrane. Model 1 suggests that porins are assembled outside the SAM channel as the...
Structure of Porins
Mitochondria, chloroplasts, and gram-negative bacteria have transmembrane, beta-barrel proteins called porins to mediate the free diffusion of ions and metabolites across the membrane. Mitochondrial porin precursors contain conserved amino acid sequences called beta signals at their C-terminal. Beta signals have a motif of PoXGXXHyXHy (Po-Polar, X-Any amino acid, G-Glycine, Hy-LargeHydrophobic), which are crucial for precursor recognition to initiate precursor assembly. Beta-barrel precursors...
Multi-pass Transmembrane Proteins and β-barrels
In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
Protein Complex Assembly
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Cytoskeletal Proteins in Bacteria
Bacterial cells were initially considered simple, randomly organized structures lacking a cytoskeleton. However, the discovery of cytoskeleton homologs in bacteria led to the change of this opinion. Bacterial cytoskeletal filaments regulate the cell shape, cell polarity, cell division, and partitioning of plasmids during cell division. It was later discovered that bacterial cytoskeletal proteins, mainly actin and tubulin homologs, are diverse compared to their eukaryotic counterparts. On the...
The Proteasome Structure
The ubiquitin-proteasome pathway is a well-known mechanism utilized by eukaryotic cells to remove cytoplasmic proteins that are misfolded, damaged, or no longer needed. In this pathway, the protein that needs to be eliminated undergoes a process called ubiquitination, where a chain of ubiquitin molecules is attached to the 48th lysine residue of the target protein. This ubiquitin modification helps the proteasome distinguish between a target protein and a healthy protein.
The proteasome is an...
The proteasome is an...

