Related Experiment Video
Updated: Jun 5, 2026

04:52
Following the Dynamics of Structural Variants in Experimentally Evolved Populations
Published on: February 3, 2023
Ecologically and evolutionarily important SNPs identified in natural populations.
Larissa M Williams1, Marjorie F Oleksiak
1Department of Environmental and Molecular Toxicology, North Carolina State University, NC, USA.
Molecular Biology and Evolution
|January 12, 2011
Summary
Natural populations rapidly evolve through natural selection, with hundreds of genetic loci potentially changing, some shared across independent pollution adaptation events.
Area of Science:
- Evolutionary Biology
- Environmental Toxicology
- Genomics
Background:
- Natural selection drives adaptive evolution in populations facing environmental changes.
- Understanding the rate and scale of genetic change during adaptation is crucial.
Purpose of the Study:
- To determine the number and speed of genetic loci evolving under severe environmental stress.
- To investigate adaptive evolution in Fundulus heteroclitus populations at polluted Superfund sites.
Main Methods:
- Genomic approaches were used to identify single nucleotide polymorphisms (SNPs) with non-neutral evolutionary patterns.
- Three statistical tests were applied to analyze SNP data from three Fundulus heteroclitus populations.
- Populations were sampled from highly polluted Superfund sites to assess adaptation.
Main Results:
- 1.4-2.5% of SNPs showed significant deviations from the neutral model in polluted populations, indicating natural selection.
- A specific SNP in the cytochrome P4501A (CYP1A) gene was identified in all polluted populations.
- CYP1A is a xenobiotic metabolizing enzyme previously noted for refractory induction in these populations.
Conclusions:
- Rapid evolution in natural populations can involve hundreds of genetic loci.
- Some loci undergoing selection may be shared across independent adaptation events to similar environmental pressures.
- Genomic analysis reveals significant adaptive genetic changes in Fundulus heteroclitus populations exposed to pollution.
Related Concept Videos
Single Nucleotide Polymorphisms-SNPs
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
Comparing Copy Number Variations and SNPs
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Multi-species Conserved Sequences
Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved DNA...
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved DNA...
Conservation of Small Populations
Small population sizes put a species at extreme risk of extinction due to a lack of variation, and a consequent decrease in adaptability. This weakens the chances of survival under pressures such as climate change, competition from other species, or new diseases. Large populations are more likely to survive pressures such as these, as such populations are more likely to harbor individuals that have genetic variants that are adaptive under new stresses. Small populations are much less likely to...
Genome-wide Association Studies-GWAS
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
Gene Evolution - Fast or Slow?
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...

