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Approximation of super-ions for single-file diffusion of multiple ions through narrow pores
Valery N Kharkyanen1, Semen O Yesylevskyy, Natalia M Berezetskaya
1Department of Physics of Biological Systems, Institute of Physics, National Academy of Sciences of Ukraine, Prospect Nauki, 46, Kiev 03039, Ukraine.
Abstract:
The general theory of the single-file multiparticle diffusion in the narrow pores could be greatly simplified in the case of inverted bell-like shape of the single-particle energy profile, which is often observed in biological ion channels. There is a narrow and deep groove in the energy landscape of multiple interacting ions in such profiles, which corresponds to the pre-defined optimal conduction pathway in the configurational space. If such groove exists, the motion of multiple ions can be reduced to the motion of single quasiparticle, called the superion, which moves in one-dimensional effective potential. The concept of the superions dramatically reduces the computational complexity of the problem and provides very clear physical interpretation of conduction phenomena in the narrow pores.
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