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Updated: Jun 5, 2026

Gastric Mucosa Quantitative Polymerase Chain Reaction Analysis for Detecting Helicobacter pylori and Antibiotic Resistance
Published on: March 7, 2025
Analysis of antibiotic susceptibility patterns of Helicobacter pylori isolates from Malaysia
Norazah Ahmad1, Wan Rasinah Zakaria, Ramelah Mohamed
1Bacteriology Unit, Institute for Medical Research, Jalan Pahang, 50588, Kuala Lumpur, Malaysia. norazah@imr.gov.my
Background:
The prevalence of antibiotic resistance varies in geographic areas. The information on the antibiotic susceptibility patterns of Helicobacter pylori (H. pylori) in our local setting is therefore relevant as a guide for the treatment options.
Objective:
This study was conducted to determine the primary resistance rates among H. pylori isolated from Malaysian patients.
Materials And Methods:
Biopsy samples were obtained from the stomach antrum and corpus of 777 patients from September 2004 until 2007. H. pylori isolated from these patients were then subjected to minimum inhibitory concentration (MICs) determination using E-test method, against metronidazole, clarithromycin, levofloxacin, ciprofloxacin, amoxicillin, and tetracycline.
Results:
From 777 patients, 119 were positive for H. pylori where a total of 187 strains were isolated. The resistance rates were noted to be 37.4% (metronidazole), 2.1% (clarithromycin), 1% (levofloxacin and ciprofloxacin), and 0% (amoxicillin and tetracycline). Different resistance profiles were observed among isolates from the antrum and corpus of 13 patients. Resistance to one type of antibiotic was observed in 36.4% of the strains where mono-resistance to metronidazole was the most common. Resistance to ≥2 antibiotics was noted in 3.3% of isolates. High metronidazole MICs of ≥256 μg/mL were observed among the resistant strains.
Conclusions:
The resistance rates of the antibiotics used in primary treatment of H. pylori infections in Malaysia are low, and multi-antibiotic-resistant strains are uncommon. Infections with mixed populations of metronidazole-sensitive and -resistant strains were also observed. However, the high metronidazole MIC values seen among the metronidazole-resistant strains are a cause for concern.
Insights
Antibiotic resistance in Helicobacter pylori is generally low in Malaysia, with multi-drug resistant strains being uncommon. However, high resistance to metronidazole is a concern for H. pylori treatment.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Antimicrobial Resistance
Background:
- Antibiotic resistance patterns for Helicobacter pylori (H. pylori) vary geographically.
- Understanding local susceptibility is crucial for effective H. pylori treatment strategies.
Purpose of the Study:
- To determine primary antibiotic resistance rates of H. pylori strains in Malaysian patients.
- To guide empirical treatment choices for H. pylori infections.
Main Methods:
- Collected 777 gastric biopsy samples from Malaysian patients between 2004 and 2007.
- Isolated H. pylori and determined Minimum Inhibitory Concentrations (MICs) against six key antibiotics using E-test.
- Tested resistance to metronidazole, clarithromycin, levofloxacin, ciprofloxacin, amoxicillin, and tetracycline.
Main Results:
- 119 patients (15.3%) were H. pylori positive, yielding 187 strains.
- High resistance observed for metronidazole (37.4%), low for clarithromycin (2.1%), levofloxacin/ciprofloxacin (1%), and none for amoxicillin/tetracycline.
- Mono-resistance to metronidazole was most common (36.4%); multi-resistance (≥2 antibiotics) was rare (3.3%).
- Metronidazole-resistant strains exhibited high MICs (≥256 μg/mL).
Conclusions:
- Primary antibiotic resistance rates for H. pylori in Malaysia are low, with uncommon multi-drug resistance.
- Mixed populations of sensitive and resistant H. pylori strains were detected.
- High MIC values for metronidazole-resistant strains warrant attention for treatment protocols.
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