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Updated: Jun 5, 2026

Synthesis of Information-bearing Peptoids and their Sequence-directed Dynamic Covalent Self-assembly
Published on: February 6, 2020
Self-assembly of neutral and cationic PdII organometallic molecular rectangles: synthesis, characterization and
Arun Kumar Bar1, Sankarasekaran Shanmugaraju, Ki-Whan Chi
1Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore, India.
Abstract:
Design and synthesis of three novel [2 + 2] self-assembled molecular rectangles 1-3via coordination driven self-assembly of predesigned Pd(ii) ligands is reported. 1,8-Diethynylanthracene was assembled with trans-Pd(PEt(3))(2)Cl(2) in the presence of CuCl catalyst to yield a neutral rectangle 1via Pd-C bond formation. Complex 1 represents the first example of a neutral molecular rectangle obtained via C-Pd coordination driven self-assembly. A new Pd(2)(II) organometallic building block with 180° bite-angle 1,4-bis[trans-(ethynyl)Pd(PEt(3))(2)(NO(3))]benzene (M(2)) containing ethynyl functionality was synthesized in reasonable yield by employing Sonagashira coupling reaction. Self-assembly of M(2) with two organic clip-type donors (L(2)-L(3)) afforded [2 + 2] self-assembled molecular rectangles 2 and 3, respectively [L(2) = 1,8-bis(4-pyridylethynyl)anthracene; L(3) = 1,3-bis(3-pyridyl)isophthalamide]. The macrocycles 1-3 were fully characterized by multinuclear NMR and ESI-MS spectroscopic techniques, and in case of 1 the structure was unambiguously determined by single crystal X-ray diffraction analysis. Incorporation of Pd-ethynyl bonds helped to make the assemblies π-electron rich and fluorescent in nature. Complexes 1-2 showed quenching of fluorescence intensity in solution in presence of nitroaromatics, which are the chemical signatures of many commercially available explosives.
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