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Distinct patterns of IFITM-mediated restriction of filoviruses, SARS coronavirus, and influenza A virus
I-Chueh Huang1, Charles C Bailey, Jessica L Weyer
1Department of Microbiology and Molecular Genetics, Harvard Medical School, New England Primate Research Center, Southborough, Massachusetts, United States of America. I-Chueh_Huang@hms.harvard.edu
Abstract:
Interferon-inducible transmembrane proteins 1, 2, and 3 (IFITM1, 2, and 3) are recently identified viral restriction factors that inhibit infection mediated by the influenza A virus (IAV) hemagglutinin (HA) protein. Here we show that IFITM proteins restricted infection mediated by the entry glycoproteins (GP(1,2)) of Marburg and Ebola filoviruses (MARV, EBOV). Consistent with these observations, interferon-β specifically restricted filovirus and IAV entry processes. IFITM proteins also inhibited replication of infectious MARV and EBOV. We observed distinct patterns of IFITM-mediated restriction: compared with IAV, the entry processes of MARV and EBOV were less restricted by IFITM3, but more restricted by IFITM1. Moreover, murine Ifitm5 and 6 did not restrict IAV, but efficiently inhibited filovirus entry. We further demonstrate that replication of infectious SARS coronavirus (SARS-CoV) and entry mediated by the SARS-CoV spike (S) protein are restricted by IFITM proteins. The profile of IFITM-mediated restriction of SARS-CoV was more similar to that of filoviruses than to IAV. Trypsin treatment of receptor-associated SARS-CoV pseudovirions, which bypasses their dependence on lysosomal cathepsin L, also bypassed IFITM-mediated restriction. However, IFITM proteins did not reduce cellular cathepsin activity or limit access of virions to acidic intracellular compartments. Our data indicate that IFITM-mediated restriction is localized to a late stage in the endocytic pathway. They further show that IFITM proteins differentially restrict the entry of a broad range of enveloped viruses, and modulate cellular tropism independently of viral receptor expression.
Insights
Interferon-inducible transmembrane proteins (IFITMs) restrict a broad range of enveloped viruses, including influenza, filoviruses (Ebola, Marburg), and SARS-CoV. These proteins act late in the endocytic pathway to inhibit viral entry and replication.
Area of Science:
- Virology
- Cell Biology
- Immunology
Background:
- Interferon-inducible transmembrane proteins (IFITMs) are known to restrict influenza A virus (IAV) infection.
- The specific mechanisms and broad spectrum of IFITM antiviral activity remain under investigation.
Purpose of the Study:
- To investigate the role of IFITM proteins in restricting the entry and replication of filoviruses (Marburg virus, Ebola virus) and SARS coronavirus.
- To elucidate the stage of the endocytic pathway where IFITM-mediated restriction occurs.
Main Methods:
- Infection assays using pseudotyped and replication-competent viruses (IAV, MARV, EBOV, SARS-CoV).
- Assessment of IFITM protein expression and localization.
- Analysis of viral entry and replication kinetics.
- Investigation of the role of endosomal acidification and cathepsin activity.
Main Results:
- IFITM proteins restrict entry mediated by filovirus glycoproteins (GP(1,2)) and SARS-CoV spike (S) protein, in addition to IAV hemagglutinin (HA).
- IFITM-mediated restriction of filoviruses and SARS-CoV differs from IAV, with IFITM1 showing stronger restriction of filoviruses and IFITM3 showing weaker restriction.
- IFITM proteins act at a late stage of the endocytic pathway, independent of cellular cathepsin activity or access to acidic compartments.
- Murine Ifitm5 and Ifitm6 specifically inhibit filovirus entry but not IAV.
Conclusions:
- IFITM proteins exhibit broad-spectrum antiviral activity against enveloped viruses, including filoviruses and coronaviruses.
- IFITM-mediated restriction is dependent on the specific viral glycoprotein and occurs late in endocytosis.
- IFITMs differentially restrict viral tropism, suggesting a complex role in innate immunity.
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