Related Experiment Video
Updated: Jun 5, 2026

Application of Impermeable Barriers Combined with Candidate Factor Soaked Beads to Study Inductive Signals in the Chick
Published on: November 17, 2016
The microRNA-processing enzyme Dicer is dispensable for somite segmentation but essential for limb bud positioning
Zhen Zhang1, Jason R O'Rourke, Michael T McManus
1Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USA.
Abstract:
Dicer is an enzyme that processes microRNAs (miRNAs) to their mature forms. As miRNAs were first discovered for their role in the control of developmental timing, we investigated their potential requirement in mouse somitogenesis, an event with precise temporal periodicity. To address the collective role of miRNAs in mesoderm development including somite formation, we used T (Brachyury)-Cre mouse line to inactivate Dicer in most cells of the mesoderm lineage. This Dicer mutant exhibits a reduced anterior-posterior axis. Somite number remains normal in mutant embryos up until the death of the embryos more than two days after Dicer inactivation. Consistent with this, the molecular machineries required for establishing segmentation, including clock and wave front, are not perturbed. However, somite size is reduced and later-formed somites are caudalized, coincident with increased cell death. Outside of the paraxial mesoderm and prior to apparent reduction of the axis in the mutant, the position of the hindlimb bud, a lateral plate mesoderm-derived structure, is posteriorly shifted and the timing of hindlimb bud initiation is delayed accordingly. We observed changes in the expression of genes critical for limb positioning, which include a shifted and delayed downregulation of Hand2 and Tbx3, and shifted and delayed upregulation of Gli3 in the prospective limb bud field. The 3' UTRs of both Hand2 and Tbx3 harbor target sites for a seed sequence-sharing family of miRNAs mir-25/32/92/363/367. As an example of the family we show that mir-363, a miRNA with elevated expression in the prospective limb bud field, is capable of inhibiting Hand2/Tbx3 expression in vitro in a binding site-dependent manner. Together, our findings provide the first demonstration that in mouse embryonic mesoderm, while Dicer is dispensable for somite segmentation, it is essential for proper limb bud positioning.
Insights
Dicer enzyme is essential for mouse limb bud positioning in embryonic mesoderm development, but not for somite segmentation. This study reveals miRNAs
Area of Science:
- Developmental Biology
- Molecular Biology
- Genetics
Background:
- MicroRNAs (miRNAs) are crucial regulators of gene expression, initially identified for their role in developmental timing.
- The enzyme Dicer processes precursor miRNAs into mature forms, enabling their regulatory functions.
- Mesoderm development, including somitogenesis and limb bud formation, involves complex temporal and spatial patterning.
Purpose of the Study:
- To investigate the role of miRNAs, processed by Dicer, in mouse embryonic mesoderm development, specifically focusing on somitogenesis and limb bud positioning.
- To determine if Dicer inactivation affects the segmentation process of somites or the formation and positioning of limb buds.
- To elucidate the molecular mechanisms by which miRNAs might regulate genes involved in limb bud development.
Main Methods:
- Utilized a T (Brachyury)-Cre mouse line to achieve conditional inactivation of the Dicer gene in the mesoderm lineage.
- Analyzed Dicer mutant embryos for defects in anterior-posterior axis formation, somitogenesis, and limb bud development.
- Examined gene expression patterns critical for limb positioning, including Hand2, Tbx3, and Gli3, in wild-type and mutant embryos.
- Performed in vitro experiments to validate miRNA-mediated regulation of target genes (e.g., mir-363 on Hand2/Tbx3).
Main Results:
- Dicer inactivation in mouse mesoderm resulted in a reduced anterior-posterior axis and increased embryonic cell death.
- Somite segmentation (number) was unaffected, but somite size was reduced and later somites were caudalized.
- Limb bud positioning was significantly altered, with posterior shifting and delayed initiation of hindlimb bud formation.
- Expression of key limb positioning genes (Hand2, Tbx3, Gli3) was perturbed in the prospective limb bud field of Dicer mutants.
- In vitro studies confirmed that specific miRNAs (e.g., mir-363) can directly regulate Hand2 and Tbx3 expression.
Conclusions:
- Dicer-dependent miRNA processing is dispensable for the fundamental process of somite segmentation in mouse embryonic mesoderm.
- However, Dicer-mediated miRNA activity is essential for the correct positioning and timely initiation of limb bud development.
- This study highlights a critical role for miRNAs in regulating gene expression critical for patterning lateral plate mesoderm derivatives, such as limb buds.
Related Concept Videos
piRNA - Piwi-interacting RNAs
Hedgehog Signaling Pathway
Role Of Notch Signalling In Intestinal Stem Cell Renewal
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...
Cis-regulatory Sequences
Experimental RNAi
Master Transcription Regulators

