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Updated: Jun 5, 2026

Microfluidic Imaging Flow Cytometry by Asymmetric-detection Time-stretch Optical Microscopy (ATOM)
Published on: June 28, 2017
Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational
Andrew T Magis1, John C Earls, Youn-Hee Ko
1Department of Computer Science, University of Illinois, Urbana, IL 61801, USA.
Summary:
The top-scoring pair (TSP) and top-scoring triplet (TST) algorithms are powerful methods for classification from expression data, but analysis of all combinations across thousands of human transcriptome samples is computationally intensive, and has not yet been achieved for TST. Implementation of these algorithms for the graphics processing unit results in dramatic speedup of two orders of magnitude, greatly increasing the searchable combinations and accelerating the pace of discovery.
Availability:
http://www.igb.illinois.edu/labs/price/downloads/.
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