Related Experiment Video
Updated: Jun 4, 2026

11:57
Whole-Brain 3D Activation and Functional Connectivity Mapping in Mice using Transcranial Functional Ultrasound Imaging
Published on: February 24, 2021
Imaging of functional connectivity in the mouse brain
Brian R White1, Adam Q Bauer, Abraham Z Snyder
1Department of Physics, Washington University, St Louis, Missouri, United States of America.
Plos One
|February 2, 2011
Summary
Researchers developed a minimally invasive functional connectivity optical intrinsic signal imaging (fcOIS) method for mice. This technique maps brain networks, bridging human fMRI studies with mouse genetic models for neuroscience discovery.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Optical Imaging
Background:
- Functional neuroimaging in mice is challenging, hindering the translation of human fMRI findings to molecular and genetic mechanisms.
- A need exists for large-scale functional neuroimaging in mice to discover functional correlates of genetic manipulations and disease models.
Purpose of the Study:
- To develop and demonstrate a novel method for functional neuroimaging in mice.
- To establish functional connectivity mapping in the mouse brain using optical intrinsic signal imaging.
Main Methods:
- Combined resting-state functional connectivity mapping with optical intrinsic signal imaging (fcOIS).
- Utilized camera-based equipment for minimally invasive imaging through the scalp without contrast agents.
- Employed iterative parcellation and clustering to synthesize network connectivity patterns.
Main Results:
- Achieved highly detailed fcOIS mapping of resting-state networks across most of the mouse cerebral cortex.
- Generated a comprehensive map of functional neuroarchitecture by synthesizing multiple network connectivity patterns.
- Successfully identified major functional regions within the mouse cerebral cortex.
Conclusions:
- fcOIS provides a powerful, minimally invasive tool for functional neuroimaging in mice.
- This method bridges human neuroscience with the genetic and molecular research capabilities of mouse models.
- Enables new research paradigms linking human brain function to mouse models of disease and genetic manipulation.

