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Updated: Jun 4, 2026

Purification of the Sarco-Endoplasmic Reticulum Ca2+-ATPase from Rabbit Muscle
Published on: March 21, 2025
Modulatory ATP binding affinity in intermediate states of E2P dephosphorylation of sarcoplasmic reticulum Ca2+-ATPase
Johannes D Clausen1, David B McIntosh, David G Woolley
1Department of Physiology and Biophysics, Aarhus University, Aarhus C, Denmark.
Abstract:
The mechanism of ATP modulation of E2P dephosphorylation of sarcoplasmic reticulum Ca(2+)-ATPase wild type and mutant forms was examined in nucleotide binding studies of states analogous to the various intermediates of the dephosphorylation reaction, obtained by binding of metal fluorides, vanadate, or thapsigargin. Wild type Ca(2+)-ATPase displays an ATP affinity of 4 μM for the E2P ground state analog, 1 μM for the E2P transition state and product state analogs, and 11 μM for the E2 dephosphoenzyme. Hence, ATP binding stabilizes the transition and product states relative to the ground state, thereby explaining the accelerating effect of ATP on dephosphorylation. Replacement of Phe(487) (N-domain) with serine, Arg(560) (N-domain) with leucine, or Arg(174) (A-domain) with alanine or glutamate reduces ATP affinity in all E2/E2P intermediate states. Alanine substitution of Ile(188) (A-domain) increases the ATP affinity, although ATP acceleration of dephosphorylation is disrupted, thus indicating that the critical role of Ile(188) in ATP modulation is mechanistically based rather than being associated with the binding of nucleotide. Mutants with alanine replacement of Lys(205) (A-domain) or Glu(439) (N-domain) exhibit an anomalous inhibition by ATP of E2P dephosphorylation, due to ATP binding increasing the stability of the E2P ground state relative to the transition state. The ATP affinity of Ca(2)E2P, stabilized by inserting four glycines in the A-M1 linker, is similar to that of the E2P ground state, but the Ca(2+)-free E1 state of this mutant exhibits 3 orders of magnitude reduction of ATP affinity.
Insights
ATP binding accelerates sarcoplasmic reticulum Ca(2+)-ATPase dephosphorylation by stabilizing transition states. Specific mutations alter ATP affinity and dephosphorylation rates, revealing key residues like Ile(188) for ATP modulation.
Area of Science:
- Biochemistry
- Molecular Biology
- Enzymology
Background:
- Sarcoplasmic reticulum Ca(2+)-ATPase (SERCA) is crucial for muscle contraction.
- ATP hydrolysis drives SERCA's ion transport cycle.
- Understanding ATP's role in dephosphorylation is key to SERCA function.
Purpose of the Study:
- To elucidate the mechanism of ATP modulation on Ca(2+)-ATPase dephosphorylation.
- To investigate the impact of specific mutations on ATP binding and dephosphorylation kinetics.
- To identify residues critical for ATP's regulatory function.
Main Methods:
- Nucleotide binding studies using dephosphorylation reaction intermediates.
- Analysis of wild-type and mutant Ca(2+)-ATPase forms.
- Characterization of ATP affinity across different enzyme states (E2P, E2).
Main Results:
- Wild-type Ca(2+)-ATPase shows increased ATP affinity for transition/product states, explaining dephosphorylation acceleration.
- Mutations in Phe(487), Arg(560), and Arg(174) reduced ATP affinity.
- Ile(188) substitution disrupted ATP acceleration, indicating a mechanistic role beyond binding.
- Lys(205) and Glu(439) mutants showed ATP inhibition, stabilizing the E2P ground state.
Conclusions:
- ATP binding stabilizes key dephosphorylation intermediates, accelerating the reaction.
- Specific amino acid residues are critical for mediating ATP's regulatory effects on Ca(2+)-ATPase.
- Mutations can alter ATP modulation, leading to altered enzyme kinetics and stability.
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